4yk3

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==Crystal Structure of the BID Domain of BepE from Bartonella henselae==
==Crystal Structure of the BID Domain of BepE from Bartonella henselae==
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<StructureSection load='4yk3' size='340' side='right' caption='[[4yk3]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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<StructureSection load='4yk3' size='340' side='right'caption='[[4yk3]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4yk3]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YK3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YK3 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4yk3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bartonella_henselae_str._Houston-1 Bartonella henselae str. Houston-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YK3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YK3 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yk1|4yk1]], [[4yk2|4yk2]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yk3 OCA], [http://pdbe.org/4yk3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yk3 RCSB], [http://www.ebi.ac.uk/pdbsum/4yk3 PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4yk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yk3 OCA], [https://pdbe.org/4yk3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4yk3 RCSB], [https://www.ebi.ac.uk/pdbsum/4yk3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4yk3 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A0R4J6H0_BARHE A0A0R4J6H0_BARHE]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The BID (Bep intracellular delivery) domain functions as secretion signal in a subfamily of protein substrates of bacterial type IV secretion (T4S) systems. It mediates transfer of (1) relaxases and the attached DNA during bacterial conjugation, and (2) numerous Bartonella effector proteins (Beps) during protein transfer into host cells infected by pathogenic Bartonella species. Furthermore, BID domains of Beps have often evolved secondary effector functions within host cells. Here, we provide crystal structures for three representative BID domains and describe a novel conserved fold characterized by a compact, antiparallel four-helix bundle topped with a hook. The conserved hydrophobic core provides a rigid scaffold to a surface that, despite a few conserved exposed residues and similarities in charge distribution, displays significant variability. We propose that the genuine function of BID domains as T4S signal may primarily depend on their rigid structure, while the plasticity of their surface may facilitate adaptation to secondary effector functions.
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The BID Domain of Type IV Secretion Substrates Forms a Conserved Four-Helix Bundle Topped with a Hook.,Stanger FV, de Beer TA, Dranow DM, Schirmer T, Phan I, Dehio C Structure. 2017 Jan 3;25(1):203-211. doi: 10.1016/j.str.2016.10.010. Epub 2016, Nov 23. PMID:27889208<ref>PMID:27889208</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4yk3" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Structural genomic]]
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[[Category: Bartonella henselae str. Houston-1]]
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[[Category: Bartonella henselae]]
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[[Category: Large Structures]]
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[[Category: Bepe]]
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[[Category: Bid domain]]
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[[Category: Protein binding]]
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[[Category: Ssgcid]]
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[[Category: Virb-translocated bartonella effector protein]]
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Current revision

Crystal Structure of the BID Domain of BepE from Bartonella henselae

PDB ID 4yk3

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