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5ag0

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==DyP-type peroxidase of Auricularia auricula-judae (AauDyPI) crystallized at pH 6.5==
==DyP-type peroxidase of Auricularia auricula-judae (AauDyPI) crystallized at pH 6.5==
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<StructureSection load='5ag0' size='340' side='right' caption='[[5ag0]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
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<StructureSection load='5ag0' size='340' side='right'caption='[[5ag0]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5ag0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Auricularia_auricula-judae Auricularia auricula-judae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AG0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AG0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5ag0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Auricularia_auricula-judae Auricularia auricula-judae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AG0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AG0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOA:GLYCOLIC+ACID'>GOA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ag1|5ag1]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOA:GLYCOLIC+ACID'>GOA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dye_decolorizing_peroxidase Dye decolorizing peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.19 1.11.1.19] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ag0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ag0 OCA], [https://pdbe.org/5ag0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ag0 RCSB], [https://www.ebi.ac.uk/pdbsum/5ag0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ag0 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ag0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ag0 OCA], [http://pdbe.org/5ag0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ag0 RCSB], [http://www.ebi.ac.uk/pdbsum/5ag0 PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DYP_AURAJ DYP_AURAJ] Manganese-independent peroxidase that is able to convert a large number of compounds, but its physiological substrate is not known. In addition to classic peroxidase substrates (e.g. 2,6-dimethoxyphenol), oxidizes dyes such as Reactive Blue 5 and Reactive Black 5.<ref>PMID:19756587</ref> <ref>PMID:23111597</ref> <ref>PMID:25153532</ref> <ref>PMID:25495127</ref> <ref>PMID:25542606</ref>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Auricularia auricula-judae]]
[[Category: Auricularia auricula-judae]]
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[[Category: Dye decolorizing peroxidase]]
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[[Category: Large Structures]]
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[[Category: Piontek, K]]
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[[Category: Piontek K]]
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[[Category: Plattner, D A]]
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[[Category: Plattner DA]]
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[[Category: Strittmatter, E]]
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[[Category: Strittmatter E]]
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[[Category: Dye-decolorizing peroxidase]]
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[[Category: Dyp]]
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[[Category: Fungal]]
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[[Category: Glycoprotein]]
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[[Category: Heme]]
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[[Category: Oxidoreductase]]
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Current revision

DyP-type peroxidase of Auricularia auricula-judae (AauDyPI) crystallized at pH 6.5

PDB ID 5ag0

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OCA

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