5hnp
From Proteopedia
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==The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt== | ==The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt== | ||
- | <StructureSection load='5hnp' size='340' side='right' caption='[[5hnp]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='5hnp' size='340' side='right'caption='[[5hnp]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[5hnp]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HNP OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5hnp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Raoultella_ornithinolytica Raoultella ornithinolytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HNP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HNP FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hnp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hnp OCA], [https://pdbe.org/5hnp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hnp RCSB], [https://www.ebi.ac.uk/pdbsum/5hnp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hnp ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Export of the Escherichia coli serotype O9a O-antigenic polysaccharides (O-PS) involves an ATP-binding cassette (ABC) transporter. The process requires a non-reducing terminal residue, which is recognized by a carbohydrate-binding module (CBM) appended to the C terminus of the nucleotide-binding domain of the transporter. Here, we investigate the process in Klebsiella pneumoniae serotype O12 (and Raoultella terrigena ATCC 33257). The O12 polysaccharide is terminated at the non-reducing end by a beta-linked 3-deoxy-d-manno-oct-2-ulosonic acid (Kdo) residue. The O12 ABC transporter also binds its cognate O-PS via a CBM, and export is dependent on the presence of the terminal beta-Kdo residue. The overall structural architecture of the O12 CBM resembles the O9a prototype, but they share only weak sequence similarity, and the putative binding pocket for the O12 glycan is different. Removal of the CBM abrogated O-PS transport, but export was restored when the CBM was expressed in trans with the mutant CBM-deficient ABC transporter. These results demonstrate that the CBM-mediated substrate-recognition mechanism is evolutionarily conserved and can operate with glycans of widely differing structures. | ||
+ | |||
+ | The Klebsiella pneumoniae O12 ATP-binding Cassette (ABC) Transporter Recognizes the Terminal Residue of Its O-antigen Polysaccharide Substrate.,Mann E, Mallette E, Clarke BR, Kimber MS, Whitfield C J Biol Chem. 2016 Apr 29;291(18):9748-61. doi: 10.1074/jbc.M116.719344. Epub 2016, Mar 2. PMID:26934919<ref>PMID:26934919</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 5hnp" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Raoultella ornithinolytica]] |
- | [[Category: | + | [[Category: Kimber MS]] |
- | [[Category: | + | [[Category: Mallette E]] |
- | [[Category: | + | [[Category: Mann E]] |
- | [[Category: | + | [[Category: Whitfield C]] |
- | + | ||
- | + |
Current revision
The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt
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