1gzi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:26, 7 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1gzi.jpg|left|200px]]
 
-
{{Structure
+
==CRYSTAL STRUCTURE OF TYPE III ANTIFREEZE PROTEIN FROM OCEAN POUT, AT 1.8 ANGSTROM RESOLUTION==
-
|PDB= 1gzi |SIZE=350|CAPTION= <scene name='initialview01'>1gzi</scene>, resolution 1.8&Aring;
+
<StructureSection load='1gzi' size='340' side='right'caption='[[1gzi]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1gzi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zoarces_americanus Zoarces americanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GZI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GZI FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
|GENE= RECOMBINANT TYPE III AFP HPLC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=8199 Macrozoarces americanus])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gzi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gzi OCA], [https://pdbe.org/1gzi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gzi RCSB], [https://www.ebi.ac.uk/pdbsum/1gzi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gzi ProSAT]</span></td></tr>
-
|DOMAIN=
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gzi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gzi OCA], [http://www.ebi.ac.uk/pdbsum/1gzi PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gzi RCSB]</span>
+
[https://www.uniprot.org/uniprot/ANP12_ZOAAM ANP12_ZOAAM] Contributes to protect fish blood from freezing at subzero sea water temperatures. Lowers the blood freezing point. Binds to nascent ice crystals and prevents further growth.
-
}}
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/1gzi_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gzi ConSurf].
 +
<div style="clear:both"></div>
-
'''CRYSTAL STRUCTURE OF TYPE III ANTIFREEZE PROTEIN FROM OCEAN POUT, AT 1.8 ANGSTROM RESOLUTION'''
+
==See Also==
-
 
+
*[[Antifreeze protein 3D structures|Antifreeze protein 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1GZI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Macrozoarces_americanus Macrozoarces americanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GZI OCA].
+
[[Category: Large Structures]]
-
[[Category: Macrozoarces americanus]]
+
[[Category: Zoarces americanus]]
-
[[Category: Single protein]]
+
[[Category: Antson AA]]
-
[[Category: Antson, A A.]]
+
[[Category: Hubbard RE]]
-
[[Category: Hubbard, R E.]]
+
[[Category: Lewis S]]
-
[[Category: Lewis, S.]]
+
[[Category: Roper DI]]
-
[[Category: Roper, D I.]]
+
[[Category: Smith DJ]]
-
[[Category: Smith, D J.]]
+
-
[[Category: antifreeze protein]]
+
-
[[Category: glycoprotein]]
+
-
[[Category: ice-binding protein]]
+
-
[[Category: macrozoarces americanus]]
+
-
[[Category: multigene family]]
+
-
[[Category: ocean pout]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:54:39 2008''
+

Current revision

CRYSTAL STRUCTURE OF TYPE III ANTIFREEZE PROTEIN FROM OCEAN POUT, AT 1.8 ANGSTROM RESOLUTION

PDB ID 1gzi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools