Sandbox Reserved 1162

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:53, 18 April 2016) (edit) (undo)
 
(One intermediate revision not shown.)
Line 2: Line 2:
= metabotropic Glutamate Receptor 5 =
= metabotropic Glutamate Receptor 5 =
== Introduction ==
== Introduction ==
-
G-coupled protein receptors [https://en.wikipedia.org/wiki/G_protein–coupled_receptor (GPCR's)] are helical trans-membrane proteins that bind to an extracellular signal and activate a cellular response. The human genome encodes for approximately 750 GPCR's, 350 of which are known to respond to extracellular ligands.<ref name="GPCRRep">PMID: 12679517 </ref> GPCR's are divided into four major classes based on sequence similarity and transduction mechanism: Class A,B,C, and F.<ref name="MSGPCR">PMID:23407534</ref> Metabotropic Glutamate Receptor 5 (<scene name='72/726409/Overview/6'>mGlu<sub>5</sub></scene>) is a class C GPCR that is involved in the G<sub>q</sub> pathway.<ref name="CCGPCR">PMID:12782243</ref> In this pathway, glutamate binds to the extracellular domain of mGlu<sub>5</sub>, and the trans-membrane domain then undergoes a conformational change that activates the coupled [http://proteopedia.org/wiki/index.php/GTP-binding_protein G-protein] on the intracellular side of the membrane.<ref name="Primary">PMID: 25042998 </ref> The activated G-protein disassociates, and the alpha subunit activates [https://en.wikipedia.org/wiki/Phospholipase_C Phospholipase C]. Phospholipase C in turn cleaves [https://en.wikipedia.org/wiki/Phosphatidylinositol_4,5-bisphosphate PIP2] to [https://en.wikipedia.org/wiki/Diglyceride DAG] and [https://en.wikipedia.org/wiki/Inositol_trisphosphate IP3]. IP3 then binds to calcium channels on the [https://en.wikipedia.org/wiki/Endoplasmic_reticulum Endoplasmic reticulum], creating an increased cellular concentration of calcium. Increased calcium concentrations thus lead to increased neuronal activity.<ref name="MSGPCR">PMID:23407534</ref> Due to its involvement in neuronal activity, mGlu<sub>5</sub> is highly expressed in neuronal and glial cells in the central nervous system, where glutamate serves as the major neurotransmitter.
+
G-coupled protein receptors [https://en.wikipedia.org/wiki/G_protein–coupled_receptor (GPCR's)] are helical trans-membrane proteins that bind to an extracellular signal and activate a cellular response. The human genome encodes for approximately 750 GPCR's, 350 of which are known to respond to extracellular ligands.<ref name="GPCRRep">PMID: 12679517 </ref> GPCR's are divided into four major classes based on sequence similarity and transduction mechanism: Classes A, B, C, and F.<ref name="MSGPCR">PMID:23407534</ref> Metabotropic Glutamate Receptor 5 (<scene name='72/726409/Overview/6'>mGlu<sub>5</sub></scene>) is a class C GPCR that is involved in the G<sub>q</sub> pathway.<ref name="CCGPCR">PMID:12782243</ref> In this pathway, glutamate binds to the extracellular domain of mGlu<sub>5</sub>, and the trans-membrane domain then undergoes a conformational change that activates the coupled [http://proteopedia.org/wiki/index.php/GTP-binding_protein G-protein] on the intracellular side of the membrane.<ref name="Primary">PMID: 25042998 </ref> The activated G-protein disassociates, and the alpha subunit activates [https://en.wikipedia.org/wiki/Phospholipase_C Phospholipase C]. Phospholipase C in turn cleaves [https://en.wikipedia.org/wiki/Phosphatidylinositol_4,5-bisphosphate PIP2] to [https://en.wikipedia.org/wiki/Diglyceride DAG] and [https://en.wikipedia.org/wiki/Inositol_trisphosphate IP<sub>3</sub>]. IP<sub>3</sub> then binds to calcium channels on the [https://en.wikipedia.org/wiki/Endoplasmic_reticulum endoplasmic reticulum], creating an increased cellular concentration of calcium. Increased calcium concentrations thus lead to increased neuronal activity.<ref name="MSGPCR">PMID:23407534</ref> Due to its involvement in neuronal activity, mGlu<sub>5</sub> is highly expressed in neuronal and glial cells in the central nervous system, where glutamate serves as the major neurotransmitter.
== Structure ==
== Structure ==
=== Overall Stucture ===
=== Overall Stucture ===
-
<scene name='72/726409/Overview/6'>mGlu<sub>5</sub></scene> is seen as a [https://en.wikipedia.org/wiki/Protein_dimer homodimer] ''in vivo,'' with each subunit being comprised of three domains: extracellular, trans-membrane and cysteine-rich. mGlu<sub>5</sub> is centered on the trans-membrane domain, comprised of seven α-helices all roughly parallel.<ref name="Primary">PMID: 25042998 </ref> Also displayed is Intracellular Loop (ICL) 1 which forms a short α-helix and interacts directly with a trans-membrane helix to stabilize mGlu<sub>5</sub>’s conformation. Additionally, ICL3 and Extracellular Loops (ECL) 1 and 3 all lack secondary structure. and ECL2 interacts with trans-membrane (TM) helices 1, 2, and 3 as well as ECL 1, again helping to stabilize the protein’s overall conformation.<ref name="Primary">PMID: 25042998 </ref>
+
<scene name='72/726409/Overview/6'>mGlu<sub>5</sub></scene> is seen as a [https://en.wikipedia.org/wiki/Protein_dimer homodimer] ''in vivo,'' with each subunit being comprised of three domains: extracellular, trans-membrane, and cysteine-rich. mGlu<sub>5</sub> is centered on the trans-membrane domain, comprised of seven α-helices all roughly parallel.<ref name="Primary">PMID: 25042998 </ref> Also displayed is Intracellular Loop (ICL) 1 which forms a short α-helix and interacts directly with a trans-membrane helix to stabilize mGlu<sub>5</sub>’s conformation. Additionally, ICL3 and Extracellular Loops (ECL) 1 and 3 all lack secondary structure. and ECL2 interacts with trans-membrane (TM) helices 1, 2, and 3 as well as ECL 1, again helping to stabilize the protein’s overall conformation.<ref name="Primary">PMID: 25042998 </ref>
===Key Interactions===
===Key Interactions===
-
A number of intramolecular interactions within the trans-membrane domain stabilize the inactive conformation of mGlu<sub>5</sub>, as demonstrated by <scene name='72/726409/Overview/6'>mGlu<sub>5</sub></scene> being represented in the inactivate state. While in the inactive state, glutamate binding to mGlu<sub>5</sub> triggers a conformational change that leads to mGlu<sub>5</sub> being in the active state and hence initiates the aforementioned [https://en.wikipedia.org/wiki/Gq_alpha_subunit G<sub>q</sub> pathway]. The first of these interactions is an ionic interaction, termed the <scene name='72/726409/Ionic_lock2/2'>Ionic Lock</scene>, between Lysine 665 of TM3 and Glutamate 770 of TM6. Evidence for the importance of this interaction came through a kinetic study of mutant proteins where both residues were separately substituted with alanine, resulting in constitutive activity of the GPCR and its coupled pathway.<ref name="Primary">PMID: 25042998 </ref> A second critical interaction that stabilizes the inactive conformer is a <scene name='72/726409/Hydrogen_bond_614-668/2'>Hydrogen Bond </scene> between Serine 614 of ICL1 and Arginine 668 of TM3. Similarly, when Serine 614 was substituted with alanine, high levels of activity were seen in the mutant GPCR.<ref name="Primary">PMID: 25042998 </ref> A <scene name='72/726404/Scene_6/10'>Disulfide Bond </scene> between Cysteine 644 of TM3 and Cysteine 733 of <scene name='72/726409/Mavoglurant_overview2/5'>ECL2</scene> is critical at anchoring ECL2 and is highly conserved across Class C GPCR’s.<ref name="Primary">PMID: 25042998 </ref> The ECL2's presence combined with the helical bundle of the trans-membrane domain creates a <scene name='72/726409/Electrogradient2/9'>Binding Cap</scene> that restricts entrance to the allosteric binding site within the seven trans-membrane α-helices. This restricted entrance has no effect on the natural ligand, glutamate, as it binds to the extracellular domain, but this entrance dictates potential drug targets that act through allosteric modulation.<ref name="Primary">PMID: 25042998 </ref>
+
A number of intramolecular interactions within the trans-membrane domain stabilize the inactive conformation of mGlu<sub>5</sub>, as demonstrated by <scene name='72/726409/Overview/6'>mGlu<sub>5</sub></scene> being represented in the inactivate state. While in the inactive state, glutamate binding to mGlu<sub>5</sub> triggers a conformational change that leads to mGlu<sub>5</sub> being in the active state and hence initiates the aforementioned [https://en.wikipedia.org/wiki/Gq_alpha_subunit G<sub>q</sub> pathway]. The first of these interactions is an ionic interaction, termed the <scene name='72/726409/Ionic_lock2/2'>Ionic Lock</scene>, between Lysine 665 of TM3 and Glutamate 770 of TM6. Evidence for the importance of this interaction came through a kinetic study of mutant proteins where both residues were separately substituted with alanine, resulting in constitutive activity of the GPCR and its coupled pathway.<ref name="Primary">PMID: 25042998 </ref> A second critical interaction that stabilizes the inactive conformer is a <scene name='72/726409/Hydrogen_bond_614-668/2'>Hydrogen Bond </scene> between Serine 614 of ICL1 and Arginine 668 of TM3. Similarly, when Serine 614 was substituted with alanine, high levels of activity were seen in the mutant GPCR.<ref name="Primary">PMID: 25042998 </ref> A <scene name='72/726404/Scene_6/10'>Disulfide Bond </scene> between Cysteine 644 of TM3 and Cysteine 733 of <scene name='72/726409/Mavoglurant_overview2/5'>ECL2</scene> is critical at anchoring ECL2 and is highly conserved across Class C GPCR’s.<ref name="Primary">PMID: 25042998 </ref> The ECL2's presence combined with the helical bundle of the trans-membrane domain creates a <scene name='72/726409/Electrogradient2/9'>Binding Cap</scene> that restricts entrance to the allosteric binding site within the seven trans-membrane α-helices. This restricted entrance has no effect on the natural ligand, glutamate, as glutamate binds to the extracellular domain, but this entrance dictates potential drug targets that act through allosteric modulation.<ref name="Primary">PMID: 25042998 </ref>
== Clinical Relevance ==
== Clinical Relevance ==
===Role in Diseases===
===Role in Diseases===
Line 18: Line 18:
The bicyclic ring system of the drug is surrounded by a pocket of mainly hydrophobic residues including Val 806, Met 802, Phe 788, Trp 785, Leu 744, Ile 651, Pro 655, and Asn 747 (Figure 1).<ref name="Primary">PMID: 25042998 </ref> The carbamate tail of Mavoglurant forms a hydrogen bond through its carbonyl oxygen to the amide side-chain of Asn 747 of TM4. A hydroxyl group similarly forms hydrogen bonds to mGlu<sub>5</sub>, specifically at two serine residues (S805 and S809) of TM7 (Figure 2). These residues form a hydrogen bonding network to other residues through their main chain atoms and a coordinated water molecule. The interactions between Mavoglurant and mGlu<sub>5</sub> involve TM helices that were not previously stabilized by any strong interactions, introducing a new level of stability that favors the inactive conformation of the protein and hence decreases the overall activity of mGlu<sub>5</sub>.<ref name="Primary">PMID: 25042998 </ref>
The bicyclic ring system of the drug is surrounded by a pocket of mainly hydrophobic residues including Val 806, Met 802, Phe 788, Trp 785, Leu 744, Ile 651, Pro 655, and Asn 747 (Figure 1).<ref name="Primary">PMID: 25042998 </ref> The carbamate tail of Mavoglurant forms a hydrogen bond through its carbonyl oxygen to the amide side-chain of Asn 747 of TM4. A hydroxyl group similarly forms hydrogen bonds to mGlu<sub>5</sub>, specifically at two serine residues (S805 and S809) of TM7 (Figure 2). These residues form a hydrogen bonding network to other residues through their main chain atoms and a coordinated water molecule. The interactions between Mavoglurant and mGlu<sub>5</sub> involve TM helices that were not previously stabilized by any strong interactions, introducing a new level of stability that favors the inactive conformation of the protein and hence decreases the overall activity of mGlu<sub>5</sub>.<ref name="Primary">PMID: 25042998 </ref>
-
Mavoglurant was met by disappointing Fragile X-syndrome trial results and ultimately discontinued for Fragile X-syndrome in 2014, but testing for dyskinesia and [https://en.wikipedia.org/wiki/Obsessive%E2%80%93compulsive_disorder Obsessive-compulsive disorder] are still in progress. [https://en.wikipedia.org/wiki/Basimglurant Basimglurant] and [https://en.wikipedia.org/wiki/MTEP MTEP] are inhibitors that are similar to Mavoglurant as they both function as negative allosteric modulators to mGlu<sub>5</sub>, and they are currently under trials to serve as medications for depression.<ref name="Clinical">PMID: 26219727 </ref><ref name=”Clinical2”>PMID: 25043733 </ref>
+
Mavoglurant was met by disappointing fragile X-syndrome trial results and ultimately discontinued for fragile X-syndrome in 2014, but testing Mavoglurant as a treatment for dyskinesia and [https://en.wikipedia.org/wiki/Obsessive%E2%80%93compulsive_disorder Obsessive-compulsive disorder] is still in progress. [https://en.wikipedia.org/wiki/Basimglurant Basimglurant] and [https://en.wikipedia.org/wiki/MTEP MTEP] are inhibitors that are similar to Mavoglurant as they both function as negative allosteric modulators to mGlu<sub>5</sub>, and they are currently under trials to serve as medications for depression.<ref name="Clinical">PMID: 26219727 </ref><ref name=”Clinical2”>PMID: 25043733 </ref>
[[Image:Mav_Hydrophobic_pocket.png |300 px|left|thumb|Figure 1. Hydrophobic Pocket Surrounding Mavoglurant]]
[[Image:Mav_Hydrophobic_pocket.png |300 px|left|thumb|Figure 1. Hydrophobic Pocket Surrounding Mavoglurant]]

Current revision

metabotropic Glutamate Receptor 5 PDB:4oo9

Drag the structure with the mouse to rotate

References

  1. Vassilatis DK, Hohmann JG, Zeng H, Li F, Ranchalis JE, Mortrud MT, Brown A, Rodriguez SS, Weller JR, Wright AC, Bergmann JE, Gaitanaris GA. The G protein-coupled receptor repertoires of human and mouse. Proc Natl Acad Sci U S A. 2003 Apr 15;100(8):4903-8. Epub 2003 Apr 4. PMID:12679517 doi:http://dx.doi.org/10.1073/pnas.0230374100
  2. 2.0 2.1 Venkatakrishnan AJ, Deupi X, Lebon G, Tate CG, Schertler GF, Babu MM. Molecular signatures of G-protein-coupled receptors. Nature. 2013 Feb 14;494(7436):185-94. doi: 10.1038/nature11896. PMID:23407534 doi:http://dx.doi.org/10.1038/nature11896
  3. Pin JP, Galvez T, Prezeau L. Evolution, structure, and activation mechanism of family 3/C G-protein-coupled receptors. Pharmacol Ther. 2003 Jun;98(3):325-54. PMID:12782243
  4. 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 Dore AS, Okrasa K, Patel JC, Serrano-Vega M, Bennett K, Cooke RM, Errey JC, Jazayeri A, Khan S, Tehan B, Weir M, Wiggin GR, Marshall FH. Structure of class C GPCR metabotropic glutamate receptor 5 transmembrane domain. Nature. 2014 Jul 31;511(7511):557-62. doi: 10.1038/nature13396. Epub 2014 Jul 6. PMID:25042998 doi:http://dx.doi.org/10.1038/nature13396
  5. Shigemoto R, Nomura S, Ohishi H, Sugihara H, Nakanishi S, Mizuno N. Immunohistochemical localization of a metabotropic glutamate receptor, mGluR5, in the rat brain. Neurosci Lett. 1993 Nov 26;163(1):53-7. PMID:8295733
  6. 6.0 6.1 Li G, Jorgensen M, Campbell BM. Metabotropic glutamate receptor 5-negative allosteric modulators for the treatment of psychiatric and neurological disorders (2009-July 2013). Pharm Pat Anal. 2013 Nov;2(6):767-802. doi: 10.4155/ppa.13.58. PMID:24237242 doi:http://dx.doi.org/10.4155/ppa.13.58
  7. Fuxe K, Borroto-Escuela DO. Basimglurant for treatment of major depressive disorder: a novel negative allosteric modulator of metabotropic glutamate receptor 5. Expert Opin Investig Drugs. 2015;24(9):1247-60. doi:, 10.1517/13543784.2015.1074175. Epub 2015 Jul 29. PMID:26219727 doi:http://dx.doi.org/10.1517/13543784.2015.1074175
  8. Domin H, Szewczyk B, Wozniak M, Wawrzak-Wlecial A, Smialowska M. Antidepressant-like effect of the mGluR5 antagonist MTEP in an astroglial degeneration model of depression. Behav Brain Res. 2014 Oct 15;273:23-33. doi: 10.1016/j.bbr.2014.07.019. Epub 2014, Jul 18. PMID:25043733 doi:http://dx.doi.org/10.1016/j.bbr.2014.07.019
Personal tools