This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5eyy
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
==Tetragonal Form of Centrolobium tomentosum seed lectin (CTL) complexed with Man1-3Man-OMe.== | ==Tetragonal Form of Centrolobium tomentosum seed lectin (CTL) complexed with Man1-3Man-OMe.== | ||
| - | <StructureSection load='5eyy' size='340' side='right' caption='[[5eyy]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='5eyy' size='340' side='right'caption='[[5eyy]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5eyy]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5eyy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Centrolobium_tomentosum Centrolobium tomentosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EYY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EYY FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand= | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.902Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5eyy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5eyy OCA], [https://pdbe.org/5eyy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5eyy RCSB], [https://www.ebi.ac.uk/pdbsum/5eyy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5eyy ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/LECC1_CENTO LECC1_CENTO] Mannose/glucose-specific lectin that also binds derivatives N-acetyl-D-glucosamine and alpha-methyl-D-mannopyranoside with even higher affinity (Ref.2, PubMed:26946944). Has hemagglutinating activity towards rabbit erythrocytes (Ref.2). Is toxic towards brine shrimp A.nauplii (Ref.2). In rats, induces dose-dependent paw edema (PubMed:26946944).<ref>PMID:26946944</ref> [REFERENCE:2] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 22: | Line 24: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Centrolobium tomentosum]] | [[Category: Centrolobium tomentosum]] | ||
| - | [[Category: Almeida | + | [[Category: Large Structures]] |
| - | [[Category: Almeida | + | [[Category: Almeida AC]] |
| - | [[Category: Cavada | + | [[Category: Almeida RPH]] |
| - | [[Category: Delatorre | + | [[Category: Cavada BS]] |
| - | [[Category: Lossio | + | [[Category: Delatorre P]] |
| - | [[Category: Nascimento | + | [[Category: Lossio CF]] |
| - | [[Category: Osterne | + | [[Category: Nascimento KS]] |
| - | [[Category: Pinto-Junior | + | [[Category: Osterne VJS]] |
| - | [[Category: Rocha | + | [[Category: Pinto-Junior VR]] |
| - | [[Category: Santiago | + | [[Category: Rocha BAM]] |
| - | [[Category: Silva-Filho | + | [[Category: Santiago MQ]] |
| - | [[Category: Teixeira | + | [[Category: Silva-Filho JC]] |
| - | + | [[Category: Teixeira CS]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Tetragonal Form of Centrolobium tomentosum seed lectin (CTL) complexed with Man1-3Man-OMe.
| |||||||||||
