5fzo
From Proteopedia
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(New page: ==Crystal structure of the catalytic domain of human JmjD1C== <StructureSection load='5fzo' size='340' side='right' caption='5fzo, resolution 1.84Å' scene=''> == ...) |
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==Crystal structure of the catalytic domain of human JmjD1C== | ==Crystal structure of the catalytic domain of human JmjD1C== | ||
| - | <StructureSection load='5fzo' size='340' side='right' caption='[[5fzo]], [[Resolution|resolution]] 1.84Å' scene=''> | + | <StructureSection load='5fzo' size='340' side='right'caption='[[5fzo]], [[Resolution|resolution]] 1.84Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5fzo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FZO OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5fzo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FZO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FZO FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> |
| - | < | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fzo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fzo OCA], [https://pdbe.org/5fzo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fzo RCSB], [https://www.ebi.ac.uk/pdbsum/5fzo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fzo ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/JHD2C_HUMAN JHD2C_HUMAN] Probable histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. May be involved in hormone-dependent transcriptional activation, by participating in recruitment to androgen-receptor target genes (By similarity). |
| + | |||
| + | ==See Also== | ||
| + | *[[Jumonji domain-containing protein 3D structures|Jumonji domain-containing protein 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Fairhead | + | [[Category: Homo sapiens]] |
| - | [[Category: Goubin | + | [[Category: Large Structures]] |
| - | [[Category: Johansson | + | [[Category: Fairhead M]] |
| - | [[Category: Krojer | + | [[Category: Goubin S]] |
| - | [[Category: McDonough | + | [[Category: Johansson C]] |
| - | [[Category: Nowak | + | [[Category: Krojer T]] |
| - | [[Category: Oppermann | + | [[Category: McDonough M]] |
| - | [[Category: Talon | + | [[Category: Nowak R]] |
| - | + | [[Category: Oppermann U]] | |
| - | + | [[Category: Talon R]] | |
Current revision
Crystal structure of the catalytic domain of human JmjD1C
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Categories: Homo sapiens | Large Structures | Fairhead M | Goubin S | Johansson C | Krojer T | McDonough M | Nowak R | Oppermann U | Talon R
