5b4s
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5b4s is ON HOLD until Paper Publication Authors: Kumasaka, T., Yorinaga, Y., Yamamoto, M., Hamada, K., Kawamukai, M. Description: [[Category: Unre...) |
|||
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of GH80 chitosanase from Mitsuaria chitosanitabida== | |
| + | <StructureSection load='5b4s' size='340' side='right'caption='[[5b4s]], [[Resolution|resolution]] 1.75Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5b4s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mitsuaria_chitosanitabida Mitsuaria chitosanitabida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B4S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B4S FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b4s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b4s OCA], [https://pdbe.org/5b4s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b4s RCSB], [https://www.ebi.ac.uk/pdbsum/5b4s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b4s ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O82856_9BURK O82856_9BURK] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Chitosanases belong to glycoside hydrolase families 5, 7, 8, 46, 75 and 80 and hydrolyse glucosamine polymers produced by partial or full deacetylation of chitin. Herein, we determined the crystal structure of chitosanase from the beta-proteobacterium, Mitsuaria chitosanitabida, (McChoA) at 1.75 A resolution; the first structure of a family 80 chitosanase. McChoA is a 34 kDa extracellular protein of 301 amino acids that fold into two (upper and lower) globular domains with an active site cleft between them. Key substrate-binding features are conserved with family 24 lysozymes and family 46 chitosanases. The distance between catalytic residues E41 and E61 (10.8 A) indicates an inverting type mechanism. Uniquely, three disulphide bridges and the C terminus might contribute to enzyme activity. | ||
| - | + | Crystal structure of a family 80 chitosanase from Mitsuaria chitosanitabida.,Yorinaga Y, Kumasaka T, Yamamoto M, Hamada K, Kawamukai M FEBS Lett. 2017 Jan 13. doi: 10.1002/1873-3468.12557. PMID:28084023<ref>PMID:28084023</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 5b4s" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: Kumasaka | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Mitsuaria chitosanitabida]] | ||
| + | [[Category: Hamada K]] | ||
| + | [[Category: Kawamukai M]] | ||
| + | [[Category: Kumasaka T]] | ||
| + | [[Category: Yamamoto M]] | ||
| + | [[Category: Yorinaga Y]] | ||
Current revision
Crystal Structure of GH80 chitosanase from Mitsuaria chitosanitabida
| |||||||||||
