5g3l
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB B-PENTAMER COMPLEXED WITH SIALYLATED SUGAR== | |
+ | <StructureSection load='5g3l' size='340' side='right'caption='[[5g3l]], [[Resolution|resolution]] 1.72Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5g3l]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_HB101 Escherichia coli HB101]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5G3L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5G3L FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=ME0:HYDROXY-L-METHIONINE'>ME0</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5g3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5g3l OCA], [https://pdbe.org/5g3l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5g3l RCSB], [https://www.ebi.ac.uk/pdbsum/5g3l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5g3l ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/E2BB_ECOLX E2BB_ECOLX] The biological activity of the toxin is produced by the A chain, which activates intracellular adenyl cyclase. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The structurally related AB5-type heat-labile enterotoxins of Escherichia coli and Vibrio cholerae are classified into two major types. The type I group includes cholera toxin and E. coli LT-I, while the type II subfamily comprises LT-IIa, LT-IIb and LT-IIc. The carbohydrate binding specificities of LT-IIa, LT-IIb and LT-IIc are distinctive from those of cholera toxin and E. coli LT-I. While CT and LT-I bind primarily to the GM1 ganglioside, LT-IIa binds to gangliosides GD1a, GD1b, and GM1, LT-IIb binds to the GD1a and GT1b gangliosides, and LT-IIc binds to GM1, GM2, GM3 and GD1a. These previous studies of the binding properties of type II B-subunits have been focused on ganglio core chain gangliosides. To further define the carbohydrate binding specificity of LT-IIb B-subunits, we have herein investigated its binding to a collection of gangliosides and non-acid glycosphingolipids with different core chains. A high affinity binding of LT-IIb B-subunits to gangliosides with neolacto core chain, as e.g Neu5Gcalpha3- and Neu5Acalpha3-neolactohexaosylceramide, and Neu5Gcalpha3- and Neu5Acalpha3-neolactooctaosylceramide was detected. An LT-IIb binding ganglioside was isolated from human small intestine and characterized as Neu5Acalpha3-neolactohexaosylceramide. The crystal structure of B-subunit of LT-IIb with the pentasaccharide moiety of Neu5Acalpha3-neolactotetraosylceramide (Neu5Ac-nLT: Neu5Acalpha3Galbeta4GlcNAcbeta3Galbeta4Glc) was determined providing the first information for sialic binding site in this sub-family, with clear differences with the one from CT and LT-I. | ||
- | + | Biochemical and structural characterization of the novel sialic acid-binding site of Escherichia coli heat-labile enterotoxin LT-IIb.,Zalem D, Ribeiro JP, Varrot A, Lebens M, Imberty A, Teneberg S Biochem J. 2016 Aug 25. pii: BCJ20160575. PMID:27562297<ref>PMID:27562297</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 5g3l" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
- | [[Category: Teneberg | + | [[Category: Escherichia coli HB101]] |
- | [[Category: | + | [[Category: Large Structures]] |
+ | [[Category: Benktander J]] | ||
+ | [[Category: Imberty A]] | ||
+ | [[Category: Lebens M]] | ||
+ | [[Category: Ribeiro JP]] | ||
+ | [[Category: Teneberg S]] | ||
+ | [[Category: Varrot A]] | ||
+ | [[Category: Zalem D]] |
Current revision
ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB B-PENTAMER COMPLEXED WITH SIALYLATED SUGAR
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