5idl

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'''Unreleased structure'''
 
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The entry 5idl is ON HOLD until Paper Publication
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==Crystal structure of the germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT8==
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<StructureSection load='5idl' size='340' side='right'caption='[[5idl]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5idl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IDL FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5idl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5idl OCA], [https://pdbe.org/5idl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5idl RCSB], [https://www.ebi.ac.uk/pdbsum/5idl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5idl ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Induction of broadly neutralizing antibodies (bnAbs) is a major HIV vaccine goal. Germline-targeting immunogens aim to initiate bnAb induction by activating bnAb germline precursor B cells. Critical unmet challenges are to determine whether bnAb precursor naive B cells bind germline-targeting immunogens and occur at sufficient frequency in humans for reliable vaccine responses. Using deep mutational scanning and multitarget optimization, we developed a germline-targeting immunogen (eOD-GT8) for diverse VRC01-class bnAbs. We then used the immunogen to isolate VRC01-class precursor naive B cells from HIV-uninfected donors. Frequencies of true VRC01-class precursors, their structures, and their eOD-GT8 affinities support this immunogen as a candidate human vaccine prime. These methods could be applied to germline targeting for other classes of HIV bnAbs and for Abs to other pathogens.
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Authors: Julien, J.P., Ereno-Orbea, J., Jardine, J.G., Schief, W.R., Wilson, I.A.
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HIV-1 broadly neutralizing antibody precursor B cells revealed by germline-targeting immunogen.,Jardine JG, Kulp DW, Havenar-Daughton C, Sarkar A, Briney B, Sok D, Sesterhenn F, Ereno-Orbea J, Kalyuzhniy O, Deresa I, Hu X, Spencer S, Jones M, Georgeson E, Adachi Y, Kubitz M, deCamp AC, Julien JP, Wilson IA, Burton DR, Crotty S, Schief WR Science. 2016 Mar 25;351(6280):1458-63. doi: 10.1126/science.aad9195. PMID:27013733<ref>PMID:27013733</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Schief, W.R]]
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<div class="pdbe-citations 5idl" style="background-color:#fffaf0;"></div>
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[[Category: Ereno-Orbea, J]]
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[[Category: Wilson, I.A]]
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==See Also==
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[[Category: Julien, J.P]]
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*[[Gp120 3D structures|Gp120 3D structures]]
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[[Category: Jardine, J.G]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Human immunodeficiency virus 1]]
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[[Category: Large Structures]]
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[[Category: Ereno-Orbea J]]
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[[Category: Jardine JG]]
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[[Category: Julien JP]]
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[[Category: Schief WR]]
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[[Category: Wilson IA]]

Current revision

Crystal structure of the germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT8

PDB ID 5idl

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