5iy9

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(New page: '''Unreleased structure''' The entry 5iy9 is ON HOLD Authors: He, Y., Yan, C., Fang, J., Inouye, C., Tjian, R., Ivanov, I., Nogales, E. Description: Human holo-PIC in the initial trans...)
Current revision (08:42, 9 October 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5iy9 is ON HOLD
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==Human holo-PIC in the initial transcribing state (no IIS)==
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<SX load='5iy9' size='340' side='right' viewer='molstar' caption='[[5iy9]], [[Resolution|resolution]] 6.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5iy9]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IY9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IY9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 6.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5iy9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iy9 OCA], [https://pdbe.org/5iy9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5iy9 RCSB], [https://www.ebi.ac.uk/pdbsum/5iy9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5iy9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/T2AG_HUMAN T2AG_HUMAN] TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with TBP mediates transcriptional activity.<ref>PMID:11030333</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In eukaryotic transcription initiation, a large multi-subunit pre-initiation complex (PIC) that assembles at the core promoter is required for the opening of the duplex DNA and identification of the start site for transcription by RNA polymerase II. Here we use cryo-electron microscropy (cryo-EM) to determine near-atomic resolution structures of the human PIC in a closed state (engaged with duplex DNA), an open state (engaged with a transcription bubble), and an initially transcribing complex (containing six base pairs of DNA-RNA hybrid). Our studies provide structures for previously uncharacterized components of the PIC, such as TFIIE and TFIIH, and segments of TFIIA, TFIIB and TFIIF. Comparison of the different structures reveals the sequential conformational changes that accompany the transition from each state to the next throughout the transcription initiation process. This analysis illustrates the key role of TFIIB in transcription bubble stabilization and provides strong structural support for a translocase activity of XPB.
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Authors: He, Y., Yan, C., Fang, J., Inouye, C., Tjian, R., Ivanov, I., Nogales, E.
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Near-atomic resolution visualization of human transcription promoter opening.,He Y, Yan C, Fang J, Inouye C, Tjian R, Ivanov I, Nogales E Nature. 2016 May 11;533(7603):359-65. doi: 10.1038/nature17970. PMID:27193682<ref>PMID:27193682</ref>
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Description: Human holo-PIC in the initial transcribing state (no IIS)
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Nogales, E]]
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<div class="pdbe-citations 5iy9" style="background-color:#fffaf0;"></div>
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[[Category: Tjian, R]]
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[[Category: He, Y]]
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==See Also==
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[[Category: Ivanov, I]]
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*[[Helicase 3D structures|Helicase 3D structures]]
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[[Category: Inouye, C]]
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*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
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[[Category: Yan, C]]
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*[[TATA-binding protein 3D structures|TATA-binding protein 3D structures]]
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[[Category: Fang, J]]
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*[[Transcription initiation factors 3D structures|Transcription initiation factors 3D structures]]
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Fang J]]
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[[Category: He Y]]
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[[Category: Inouye C]]
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[[Category: Ivanov I]]
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[[Category: Nogales E]]
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[[Category: Tjian R]]
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[[Category: Yan C]]

Current revision

Human holo-PIC in the initial transcribing state (no IIS)

5iy9, resolution 6.30Å

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