This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5jgk
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5jgk is ON HOLD Authors: Dolan, S.K., Bock, T., Hering, V., Jones, G.W., Blankenfeldt, W., Dolye, S. Description: Crystal structure of GtmA in comp...) |
|||
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of GtmA in complex with SAH== | |
| + | <StructureSection load='5jgk' size='340' side='right'caption='[[5jgk]], [[Resolution|resolution]] 1.33Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5jgk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_fumigatus_Z5 Aspergillus fumigatus Z5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JGK FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.33Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jgk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jgk OCA], [https://pdbe.org/5jgk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jgk RCSB], [https://www.ebi.ac.uk/pdbsum/5jgk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jgk ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q4X158_ASPFU Q4X158_ASPFU] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Gliotoxin is an epipolythiodioxopiperazine (ETP) class toxin, contains a disulfide bridge that mediates its toxic effects via redox cycling and is produced by the opportunistic fungal pathogen Aspergillus fumigatus Self-resistance against gliotoxin is effected by the gliotoxin oxidase GliT, and attenuation of gliotoxin biosynthesis is catalysed by gliotoxin S-methyltransferase GtmA. Here we describe the X-ray crystal structures of GtmA-apo (1.66 A), GtmA complexed to S-adenosylhomocysteine (1.33 A) and GtmA complexed to S-adenosylmethionine (2.28 A), providing mechanistic insights into this important biotransformation. We further reveal that simultaneous elimination of the ability of A. fumigatus to dissipate highly reactive dithiol gliotoxin, via deletion of GliT and GtmA, results in the most significant hypersensitivity to exogenous gliotoxin observed to date. Indeed, quantitative proteomic analysis of DeltagliT::DeltagtmA reveals an uncontrolled over-activation of the gli-cluster upon gliotoxin exposure. The data presented herein reveal, for the first time, the extreme risk associated with intracellular dithiol gliotoxin biosynthesis-in the absence of an efficient dismutation capacity. Significantly, a previously concealed protective role for GtmA and functionality of ETP bis-thiomethylation as an ancestral protection strategy against dithiol compounds is now evident. | ||
| - | + | Structural, mechanistic and functional insight into gliotoxin bis-thiomethylation in Aspergillus fumigatus.,Dolan SK, Bock T, Hering V, Owens RA, Jones GW, Blankenfeldt W, Doyle S Open Biol. 2017 Feb;7(2). pii: 160292. doi: 10.1098/rsob.160292. PMID:28179499<ref>PMID:28179499</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 5jgk" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: Dolan | + | <references/> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: Hering | + | </StructureSection> |
| - | [[Category: Jones | + | [[Category: Aspergillus fumigatus Z5]] |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Blankenfeldt W]] | ||
| + | [[Category: Bock T]] | ||
| + | [[Category: Dolan SK]] | ||
| + | [[Category: Dolye S]] | ||
| + | [[Category: Hering V]] | ||
| + | [[Category: Jones GW]] | ||
Current revision
Crystal structure of GtmA in complex with SAH
| |||||||||||
