5g3l

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'''Unreleased structure'''
 
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The entry 5g3l is ON HOLD
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==ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB B-PENTAMER COMPLEXED WITH SIALYLATED SUGAR==
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<StructureSection load='5g3l' size='340' side='right'caption='[[5g3l]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5g3l]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_HB101 Escherichia coli HB101]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5G3L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5G3L FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=ME0:HYDROXY-L-METHIONINE'>ME0</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5g3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5g3l OCA], [https://pdbe.org/5g3l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5g3l RCSB], [https://www.ebi.ac.uk/pdbsum/5g3l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5g3l ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/E2BB_ECOLX E2BB_ECOLX] The biological activity of the toxin is produced by the A chain, which activates intracellular adenyl cyclase.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The structurally related AB5-type heat-labile enterotoxins of Escherichia coli and Vibrio cholerae are classified into two major types. The type I group includes cholera toxin and E. coli LT-I, while the type II subfamily comprises LT-IIa, LT-IIb and LT-IIc. The carbohydrate binding specificities of LT-IIa, LT-IIb and LT-IIc are distinctive from those of cholera toxin and E. coli LT-I. While CT and LT-I bind primarily to the GM1 ganglioside, LT-IIa binds to gangliosides GD1a, GD1b, and GM1, LT-IIb binds to the GD1a and GT1b gangliosides, and LT-IIc binds to GM1, GM2, GM3 and GD1a. These previous studies of the binding properties of type II B-subunits have been focused on ganglio core chain gangliosides. To further define the carbohydrate binding specificity of LT-IIb B-subunits, we have herein investigated its binding to a collection of gangliosides and non-acid glycosphingolipids with different core chains. A high affinity binding of LT-IIb B-subunits to gangliosides with neolacto core chain, as e.g Neu5Gcalpha3- and Neu5Acalpha3-neolactohexaosylceramide, and Neu5Gcalpha3- and Neu5Acalpha3-neolactooctaosylceramide was detected. An LT-IIb binding ganglioside was isolated from human small intestine and characterized as Neu5Acalpha3-neolactohexaosylceramide. The crystal structure of B-subunit of LT-IIb with the pentasaccharide moiety of Neu5Acalpha3-neolactotetraosylceramide (Neu5Ac-nLT: Neu5Acalpha3Galbeta4GlcNAcbeta3Galbeta4Glc) was determined providing the first information for sialic binding site in this sub-family, with clear differences with the one from CT and LT-I.
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Authors: ZALEM, D., Benktander, J., Ribeiro, J.P., Varrot, A., Lebens, M., Imberty, A., Teneberg, S.
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Biochemical and structural characterization of the novel sialic acid-binding site of Escherichia coli heat-labile enterotoxin LT-IIb.,Zalem D, Ribeiro JP, Varrot A, Lebens M, Imberty A, Teneberg S Biochem J. 2016 Aug 25. pii: BCJ20160575. PMID:27562297<ref>PMID:27562297</ref>
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Description: ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB B-PENTAMER COMPLEXED WITH SIALYLATED SUGAR
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Lebens, M]]
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<div class="pdbe-citations 5g3l" style="background-color:#fffaf0;"></div>
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[[Category: Ribeiro, J.P]]
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== References ==
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[[Category: Varrot, A]]
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<references/>
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[[Category: Imberty, A]]
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__TOC__
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[[Category: Zalem, D]]
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</StructureSection>
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[[Category: Teneberg, S]]
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[[Category: Escherichia coli HB101]]
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[[Category: Benktander, J]]
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[[Category: Large Structures]]
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[[Category: Benktander J]]
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[[Category: Imberty A]]
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[[Category: Lebens M]]
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[[Category: Ribeiro JP]]
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[[Category: Teneberg S]]
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[[Category: Varrot A]]
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[[Category: Zalem D]]

Current revision

ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB B-PENTAMER COMPLEXED WITH SIALYLATED SUGAR

PDB ID 5g3l

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