This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5joy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "5joy" [edit=sysop:move=sysop])
Current revision (07:24, 1 May 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5joy is ON HOLD until Paper Publication
+
==Bacteroides ovatus Xyloglucan PUL GH43A in complex with AraLOG==
-
 
+
<StructureSection load='5joy' size='340' side='right'caption='[[5joy]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
Authors: Thompson, A.J., Hemsworth, G.R., Stepper, J., Sobala, L.F., Coyle, T., Larsbrink, J., Spadiut, O., Stubbs, K.A., Brumer, H., Davies, G.J.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[5joy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_ovatus Bacteroides ovatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JOY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JOY FirstGlance]. <br>
-
Description: Bacteroides ovatus Xyloglucan PUL GH43A in complex with AraLOG
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6LW:(2~{Z},3~{R},4~{R},5~{S})-2-HYDROXYIMINO-5-(HYDROXYMETHYL)OXOLANE-3,4-DIOL'>6LW</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
[[Category: Hemsworth, G.R]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5joy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5joy OCA], [https://pdbe.org/5joy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5joy RCSB], [https://www.ebi.ac.uk/pdbsum/5joy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5joy ProSAT]</span></td></tr>
-
[[Category: Davies, G.J]]
+
</table>
-
[[Category: Coyle, T]]
+
== Function ==
-
[[Category: Sobala, L.F]]
+
[https://www.uniprot.org/uniprot/GH43A_BACO1 GH43A_BACO1] Alpha-L-arabinofuranosidase involved in xyloglucan degradation by mediating the cleavage of terminal non-reducing alpha-L-arabinofuranoside residues in xyloglucan branches, converting the 'S' units to 'X' units.<ref>PMID:24463512</ref>
-
[[Category: Spadiut, O]]
+
== References ==
-
[[Category: Stepper, J]]
+
<references/>
-
[[Category: Brumer, H]]
+
__TOC__
-
[[Category: Thompson, A.J]]
+
</StructureSection>
-
[[Category: Stubbs, K.A]]
+
[[Category: Bacteroides ovatus]]
-
[[Category: Larsbrink, J]]
+
[[Category: Large Structures]]
 +
[[Category: Brumer H]]
 +
[[Category: Coyle T]]
 +
[[Category: Davies GJ]]
 +
[[Category: Hemsworth GR]]
 +
[[Category: Larsbrink J]]
 +
[[Category: Sobala LF]]
 +
[[Category: Spadiut O]]
 +
[[Category: Stepper J]]
 +
[[Category: Stubbs KA]]
 +
[[Category: Thompson AJ]]

Current revision

Bacteroides ovatus Xyloglucan PUL GH43A in complex with AraLOG

PDB ID 5joy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5joy"
Personal tools