5jx3
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5jx3 is ON HOLD Authors: Schormann, N., Chattopadhyay, D. Description: Wild type D4 in orthorhombic space group Category: Unreleased Structures...) |
|||
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Wild type D4 in orthorhombic space group== | |
| + | <StructureSection load='5jx3' size='340' side='right'caption='[[5jx3]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5jx3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Vaccinia_virus_WR Vaccinia virus WR]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2owr 2owr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JX3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JX3 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jx3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jx3 OCA], [https://pdbe.org/5jx3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jx3 RCSB], [https://www.ebi.ac.uk/pdbsum/5jx3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jx3 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/UNG_VACCW UNG_VACCW] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. Also part of a heterodimeric processivity factor which potentiates the DNA polymerase activity. Binds to DNA (By similarity). | ||
| - | + | ==See Also== | |
| - | + | *[[DNA glycosylase 3D structures|DNA glycosylase 3D structures]] | |
| - | + | __TOC__ | |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: Chattopadhyay | + | [[Category: Large Structures]] |
| - | [[Category: Schormann | + | [[Category: Vaccinia virus WR]] |
| + | [[Category: Chattopadhyay D]] | ||
| + | [[Category: Schormann N]] | ||
Current revision
Wild type D4 in orthorhombic space group
| |||||||||||
