5kd0

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(New page: '''Unreleased structure''' The entry 5kd0 is ON HOLD Authors: FeiSun, Bingquan Gao Description: Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus [[Cat...)
Current revision (10:45, 27 September 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5kd0 is ON HOLD
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==Crystal structure of the aromatic prenyltransferase AtaPT(E91A) mutant from Aspergillus terreus A8-4 in complex with geranyl S-thiolodiphosphate and (+)-butyrolactone II==
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<StructureSection load='5kd0' size='340' side='right'caption='[[5kd0]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5kd0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_terreus Aspergillus terreus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KD0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KD0 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.82&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GST:GERANYL+S-THIOLODIPHOSPHATE'>GST</scene>, <scene name='pdbligand=XBU:METHYL+(2~{R})-3-(4-HYDROXYPHENYL)-2-[(4-HYDROXYPHENYL)METHYL]-4-OXIDANYL-5-OXIDANYLIDENE-FURAN-2-CARBOXYLATE'>XBU</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kd0 OCA], [https://pdbe.org/5kd0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kd0 RCSB], [https://www.ebi.ac.uk/pdbsum/5kd0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kd0 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A1B0UHJ4_ASPTE A0A1B0UHJ4_ASPTE]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Aromatic prenyltransferases (aPTases) transfer prenyl moieties from isoprenoid donors to various aromatic acceptors, some of which have the rare property of extreme enzymatic promiscuity toward both a variety of prenyl donors and a large diversity of acceptors. In this study, we discovered a new aPTase, AtaPT, from Aspergillus terreus that exhibits unprecedented promiscuity toward diverse aromatic acceptors and prenyl donors and also yields products with a range of prenylation patterns. Systematic crystallographic studies revealed various discrete conformations for ligand binding with donor-dependent acceptor specificity and multiple binding sites within a spacious hydrophobic substrate-binding pocket. Further structure-guided mutagenesis of active sites at the substrate-binding pocket is responsible for altering the specificity and promiscuity toward substrates and the diversity of product prenylations. Our study reveals the molecular mechanism underlying the promiscuity of AtaPT and suggests an efficient protein engineering strategy to generate new prenylated derivatives in drug discovery applications.
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Authors: FeiSun, Bingquan Gao
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Molecular insights into the enzyme promiscuity of an aromatic prenyltransferase.,Chen R, Gao B, Liu X, Ruan F, Zhang Y, Lou J, Feng K, Wunsch C, Li SM, Dai J, Sun F Nat Chem Biol. 2017 Feb;13(2):226-234. doi: 10.1038/nchembio.2263. Epub 2016 Dec , 19. PMID:27992881<ref>PMID:27992881</ref>
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Description: Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Feisun, Bingquan Gao]]
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<div class="pdbe-citations 5kd0" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Aspergillus terreus]]
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[[Category: Large Structures]]
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[[Category: Gao B]]
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[[Category: Sun F]]

Current revision

Crystal structure of the aromatic prenyltransferase AtaPT(E91A) mutant from Aspergillus terreus A8-4 in complex with geranyl S-thiolodiphosphate and (+)-butyrolactone II

PDB ID 5kd0

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