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5kh6

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(New page: '''Unreleased structure''' The entry 5kh6 is ON HOLD Authors: Walker, J.R., Harding, R.J., Mader, P., Dobrovetsky, E., Dong, A., von Delft, F., Collins, P., Douangamath, A., Brandao-Net...)
Current revision (10:46, 27 September 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5kh6 is ON HOLD
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==SETDB1 in complex with a fragment candidate==
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<StructureSection load='5kh6' size='340' side='right'caption='[[5kh6]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5kh6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KH6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KH6 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6SU:METHYL+3-(METHYLSULFONYLAMINO)BENZOATE'>6SU</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kh6 OCA], [https://pdbe.org/5kh6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kh6 RCSB], [https://www.ebi.ac.uk/pdbsum/5kh6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kh6 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SETB1_HUMAN SETB1_HUMAN] Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3. H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in euchromatin regions, thereby playing a central role in the silencing of euchromatic genes. H3 'Lys-9' trimethylation is coordinated with DNA methylation. Probably forms a complex with MBD1 and ATF7IP that represses transcription and couples DNA methylation and histone 'Lys-9' trimethylation. Its activity is dependent on MBD1 and is heritably maintained through DNA replication by being recruited by CAF-1. SETDB1 is targeted to histone H3 by TRIM28/TIF1B, a factor recruited by KRAB zinc-finger proteins.<ref>PMID:12869583</ref> <ref>PMID:14536086</ref> <ref>PMID:15327775</ref> <ref>PMID:17952062</ref>
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Authors: Walker, J.R., Harding, R.J., Mader, P., Dobrovetsky, E., Dong, A., von Delft, F., Collins, P., Douangamath, A., Brandao-Neto, J., Brown, P.J., Schapira, M., Arrowsmith, C.H., Edwards, A.M., Santhakumar, V., Structural Genomics Consortium (SGC)
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==See Also==
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*[[Histone methyltransferase 3D structures|Histone methyltransferase 3D structures]]
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Description: SETDB1 in complex with a fragment candidate
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== References ==
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[[Category: Unreleased Structures]]
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<references/>
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[[Category: Brandao-Neto, J]]
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__TOC__
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[[Category: Dong, A]]
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</StructureSection>
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[[Category: Schapira, M]]
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[[Category: Homo sapiens]]
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[[Category: Dobrovetsky, E]]
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[[Category: Large Structures]]
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[[Category: Walker, J.R]]
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[[Category: Arrowsmith CH]]
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[[Category: Douangamath, A]]
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[[Category: Brandao-Neto J]]
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[[Category: Mader, P]]
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[[Category: Brown PJ]]
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[[Category: Collins, P]]
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[[Category: Collins P]]
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[[Category: Arrowsmith, C.H]]
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[[Category: Dobrovetsky E]]
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[[Category: Santhakumar, V]]
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[[Category: Dong A]]
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[[Category: Brown, P.J]]
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[[Category: Douangamath A]]
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[[Category: Von Delft, F]]
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[[Category: Edwards AM]]
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[[Category: Edwards, A.M]]
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[[Category: Harding RJ]]
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[[Category: Structural Genomics Consortium (Sgc)]]
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[[Category: Mader P]]
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[[Category: Harding, R.J]]
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[[Category: Pearce N]]
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[[Category: Santhakumar V]]
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[[Category: Schapira M]]
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[[Category: Walker JR]]
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[[Category: Von Delft F]]

Current revision

SETDB1 in complex with a fragment candidate

PDB ID 5kh6

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