5jx3

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==Wild type D4 in orthorhombic space group==
==Wild type D4 in orthorhombic space group==
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<StructureSection load='5jx3' size='340' side='right' caption='[[5jx3]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<StructureSection load='5jx3' size='340' side='right'caption='[[5jx3]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5jx3]] is a 8 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2owr 2owr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JX3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JX3 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5jx3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Vaccinia_virus_WR Vaccinia virus WR]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2owr 2owr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JX3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JX3 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5jx0|5jx0]], [[5jx8|5jx8]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uracil-DNA_glycosylase Uracil-DNA glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.27 3.2.2.27] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jx3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jx3 OCA], [https://pdbe.org/5jx3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jx3 RCSB], [https://www.ebi.ac.uk/pdbsum/5jx3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jx3 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jx3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jx3 OCA], [http://pdbe.org/5jx3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jx3 RCSB], [http://www.ebi.ac.uk/pdbsum/5jx3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jx3 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/UNG_VACCW UNG_VACCW]] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. Also part of a heterodimeric processivity factor which potentiates the DNA polymerase activity. Binds to DNA (By similarity).
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[https://www.uniprot.org/uniprot/UNG_VACCW UNG_VACCW] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. Also part of a heterodimeric processivity factor which potentiates the DNA polymerase activity. Binds to DNA (By similarity).
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==See Also==
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*[[DNA glycosylase 3D structures|DNA glycosylase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Uracil-DNA glycosylase]]
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[[Category: Large Structures]]
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[[Category: Chattopadhyay, D]]
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[[Category: Vaccinia virus WR]]
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[[Category: Schormann, N]]
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[[Category: Chattopadhyay D]]
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[[Category: Dna repair enzyme component of processivity factor poxvirus]]
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[[Category: Schormann N]]
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[[Category: Hydrolase]]
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Current revision

Wild type D4 in orthorhombic space group

PDB ID 5jx3

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