5c6e

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==Joint X-ray/neutron structure of equine cyanomet hemoglobin in R state==
==Joint X-ray/neutron structure of equine cyanomet hemoglobin in R state==
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<StructureSection load='5c6e' size='340' side='right' caption='[[5c6e]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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<StructureSection load='5c6e' size='340' side='right'caption='[[5c6e]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5c6e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C6E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C6E FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5c6e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C6E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5C6E FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Hybrid , Neutron Diffraction , X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5c8i|5c8i]], [[5ccd|5ccd]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c6e OCA], [http://pdbe.org/5c6e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c6e RCSB], [http://www.ebi.ac.uk/pdbsum/5c6e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5c6e ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5c6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c6e OCA], [https://pdbe.org/5c6e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5c6e RCSB], [https://www.ebi.ac.uk/pdbsum/5c6e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5c6e ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/HBA_HORSE HBA_HORSE]] Involved in oxygen transport from the lung to the various peripheral tissues. [[http://www.uniprot.org/uniprot/HBB_HORSE HBB_HORSE]] Involved in oxygen transport from the lung to the various peripheral tissues.
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[https://www.uniprot.org/uniprot/HBA_HORSE HBA_HORSE] Involved in oxygen transport from the lung to the various peripheral tissues.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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X-ray and neutron crystallographic techniques provide complementary information on the structure and function of biological macromolecules. X-ray and neutron (XN) crystallographic data have been combined in a joint structure-refinement procedure that has been developed using recent advances in modern computational methodologies, including cross-validated maximum-likelihood target functions with gradient-based optimization and simulated annealing. The XN approach for complete (including hydrogen) macromolecular structure analysis provides more accurate and complete structures, as demonstrated for diisopropyl fluorophosphatase, photoactive yellow protein and human aldose reductase. Furthermore, this method has several practical advantages, including the easier determination of the orientation of water molecules, hydroxyl groups and some amino-acid side chains.
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Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules.,Adams PD, Mustyakimov M, Afonine PV, Langan P Acta Crystallogr D Biol Crystallogr. 2009 Jun;65(Pt 6):567-73. doi:, 10.1107/S0907444909011548. Epub 2009 May 15. PMID:19465771<ref>PMID:19465771</ref>
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==See Also==
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*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 5c6e" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Equus caballus]]
[[Category: Equus caballus]]
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[[Category: Dajnowicz, S]]
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[[Category: Large Structures]]
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[[Category: Fisher, S Z]]
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[[Category: Dajnowicz S]]
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[[Category: Hanson, B L]]
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[[Category: Fisher SZ]]
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[[Category: Kovalevsky, A Y]]
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[[Category: Hanson BL]]
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[[Category: Langan, P]]
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[[Category: Kovalevsky AY]]
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[[Category: Mueser, T C]]
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[[Category: Langan P]]
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[[Category: Sean, S]]
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[[Category: Mueser TC]]
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[[Category: Equine hemoglobin]]
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[[Category: Sean S]]
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[[Category: Oxygen transport]]
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[[Category: R-state]]
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Current revision

Joint X-ray/neutron structure of equine cyanomet hemoglobin in R state

PDB ID 5c6e

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