This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5etl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:23, 12 July 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==E. coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.82 angstrom resolution==
==E. coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.82 angstrom resolution==
-
<StructureSection load='5etl' size='340' side='right' caption='[[5etl]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
+
<StructureSection load='5etl' size='340' side='right'caption='[[5etl]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5etl]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ETL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ETL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5etl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ETL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ETL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5RV:2-[(2-AZANYL-6-OXIDANYLIDENE-3,9-DIHYDROPURIN-8-YL)SULFANYLMETHYL]BENZENECARBONITRILE'>5RV</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5etk|5etk]], [[5etm|5etm]], [[5etn|5etn]], [[5eto|5eto]], [[5etp|5etp]], [[5etq|5etq]], [[5etr|5etr]], [[5ets|5ets]], [[5ett|5ett]], [[5etv|5etv]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5RV:2-[(2-AZANYL-6-OXIDANYLIDENE-3,9-DIHYDROPURIN-8-YL)SULFANYLMETHYL]BENZENECARBONITRILE'>5RV</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.6.3 2.7.6.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5etl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5etl OCA], [https://pdbe.org/5etl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5etl RCSB], [https://www.ebi.ac.uk/pdbsum/5etl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5etl ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5etl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5etl OCA], [http://pdbe.org/5etl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5etl RCSB], [http://www.ebi.ac.uk/pdbsum/5etl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5etl ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HPPK_ECOLI HPPK_ECOLI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5etl" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5etl" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[HPPK 3D structures|HPPK 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase]]
+
[[Category: Escherichia coli]]
-
[[Category: Dennis, M L]]
+
[[Category: Large Structures]]
-
[[Category: Peat, T S]]
+
[[Category: Dennis ML]]
-
[[Category: Swarbrick, J D]]
+
[[Category: Peat TS]]
-
[[Category: Ampcpp]]
+
[[Category: Swarbrick JD]]
-
[[Category: Complex]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Pyrophosphokinase]]
+
-
[[Category: Transferase-transferase inhibitor complex]]
+

Current revision

E. coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.82 angstrom resolution

PDB ID 5etl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5etl"
Personal tools