This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ipo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:05, 30 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Solution Structure of Hge36: Scorpine-like Peptide from Hadrurus Gertschi==
==Solution Structure of Hge36: Scorpine-like Peptide from Hadrurus Gertschi==
-
<StructureSection load='5ipo' size='340' side='right' caption='[[5ipo]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='5ipo' size='340' side='right'caption='[[5ipo]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ipo]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IPO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IPO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ipo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hadrurus_gertschi Hadrurus gertschi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IPO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IPO FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ipo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ipo OCA], [http://pdbe.org/5ipo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ipo RCSB], [http://www.ebi.ac.uk/pdbsum/5ipo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ipo ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ipo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ipo OCA], [https://pdbe.org/5ipo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ipo RCSB], [https://www.ebi.ac.uk/pdbsum/5ipo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ipo ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/KBX3_HADGE KBX3_HADGE]] Hge-scorpine has antibacterial activity against B.subtilis, but not against S.aureus. Also has hemolytic and cytolytic activities.<ref>PMID:18030427</ref> Hge36 peptide blocks Kv1.1/KCNA1 (IC(50)=185 nM) potassium channels. Shows a weak hemolytic activity.<ref>PMID:18030427</ref>
+
[https://www.uniprot.org/uniprot/KBX3_HOFGE KBX3_HOFGE] Has antibacterial activity against B.subtilis, but not against S.aureus. Also has hemolytic and cytolytic activities.<ref>PMID:18030427</ref> Blocks Kv1.1/KCNA1 (IC(50)=185 nM) potassium channels. Shows a weak hemolytic activity.<ref>PMID:18030427</ref> <ref>PMID:27314815</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Flores-Solis, D]]
 
-
[[Category: Rio-Portilla, F del]]
 
-
[[Category: Vega, R Rodriguez De La]]
 
-
[[Category: Antiparasitic activity]]
 
[[Category: Hadrurus gertschi]]
[[Category: Hadrurus gertschi]]
-
[[Category: Scorpine-like peptide]]
+
[[Category: Large Structures]]
-
[[Category: Toxin]]
+
[[Category: Flores-Solis D]]
 +
[[Category: Rodriguez De La Vega R]]
 +
[[Category: Del Rio-Portilla F]]

Current revision

Solution Structure of Hge36: Scorpine-like Peptide from Hadrurus Gertschi

PDB ID 5ipo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools