2n7a

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==NMR structure of human I-type lectin domain==
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==Solution structure of the human Siglec-8 lectin domain==
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<StructureSection load='2n7a' size='340' side='right' caption='[[2n7a]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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<StructureSection load='2n7a' size='340' side='right'caption='[[2n7a]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2n7a]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2N7A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2N7A FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2n7a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2N7A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2N7A FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2n7b|2n7b]]</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2n7a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2n7a OCA], [http://pdbe.org/2n7a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2n7a RCSB], [http://www.ebi.ac.uk/pdbsum/2n7a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2n7a ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2n7a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2n7a OCA], [https://pdbe.org/2n7a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2n7a RCSB], [https://www.ebi.ac.uk/pdbsum/2n7a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2n7a ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SIGL8_HUMAN SIGL8_HUMAN]] Putative adhesion molecule that mediates sialic-acid dependent binding to cells. Preferentially binds to alpha-2,3-linked sialic acid. Also binds to alpha-2,6-linked sialic acid. The sialic acid recognition site may be masked by cis interactions with sialic acids on the same cell surface.
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[https://www.uniprot.org/uniprot/SIGL8_HUMAN SIGL8_HUMAN] Putative adhesion molecule that mediates sialic-acid dependent binding to cells. Preferentially binds to alpha-2,3-linked sialic acid. Also binds to alpha-2,6-linked sialic acid. The sialic acid recognition site may be masked by cis interactions with sialic acids on the same cell surface.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Siglec-8 is a human immune-inhibitory receptor that, when engaged by specific self-glycans, triggers eosinophil apoptosis and inhibits mast cell degranulation, providing an endogenous mechanism to down-regulate immune responses of these central inflammatory effector cells. Here we used solution NMR spectroscopy to dissect the fine specificity of Siglec-8 toward different sialylated and sulfated carbohydrate ligands and determined the structure of the Siglec-8 lectin domain in complex with its prime glycan target 6'-sulfo sialyl Lewis(x) A canonical motif for sialic acid recognition, extended by a secondary motif formed by unique loop regions, recognizing 6-O-sulfated galactose dictates tight specificity distinct from other Siglec family members and any other endogenous glycan recognition receptors. Structure-guided mutagenesis revealed key contacts of both interfaces to be equally essential for binding. Our work provides critical structural and mechanistic insights into how Siglec-8 selectively recognizes its glycan target, rationalizes the functional impact of site-specific glycan sulfation in modulating this lectin-glycan interaction, and will enable the rational design of Siglec-8-targeted agonists to treat eosinophil- and mast cell-related allergic and inflammatory diseases, such as asthma.
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Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.,Propster JM, Yang F, Rabbani S, Ernst B, Allain FH, Schubert M Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):E4170-9. doi:, 10.1073/pnas.1602214113. Epub 2016 Jun 29. PMID:27357658<ref>PMID:27357658</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2n7a" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Allain, F H.T]]
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[[Category: Homo sapiens]]
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[[Category: Ernst, B]]
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[[Category: Large Structures]]
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[[Category: Proepster, J M]]
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[[Category: Allain FH-T]]
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[[Category: Rabbani, S]]
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[[Category: Ernst B]]
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[[Category: Schubert, M]]
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[[Category: Proepster JM]]
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[[Category: Yang, F]]
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[[Category: Rabbani S]]
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[[Category: Carbohydrate-binding receptor]]
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[[Category: Schubert M]]
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[[Category: I-type lectin]]
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[[Category: Yang F]]
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[[Category: Saf-2]]
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[[Category: Sialic acid-binding immunoglobulin-like lectin 8]]
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[[Category: Siglec8]]
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[[Category: Structural protein]]
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Current revision

Solution structure of the human Siglec-8 lectin domain

PDB ID 2n7a

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