5ieb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:47, 30 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Solution structure of SdrG from Sphingomonas melonis Fr1==
==Solution structure of SdrG from Sphingomonas melonis Fr1==
-
<StructureSection load='5ieb' size='340' side='right' caption='[[5ieb]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='5ieb' size='340' side='right'caption='[[5ieb]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ieb]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IEB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IEB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ieb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingomonas_melonis_FR1 Sphingomonas melonis FR1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IEB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IEB FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ieb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ieb OCA], [http://pdbe.org/5ieb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ieb RCSB], [http://www.ebi.ac.uk/pdbsum/5ieb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ieb ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ieb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ieb OCA], [https://pdbe.org/5ieb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ieb RCSB], [https://www.ebi.ac.uk/pdbsum/5ieb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ieb ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0D1MA58_9SPHN A0A0D1MA58_9SPHN]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Two-component systems are major signal transduction pathways, which consist of histidine kinases and response regulators that communicate through phosphorylation. Here, we highlight a distinct class of single-domain response regulators containing the PFXFATG[G/Y] motif that are activated by a mechanism distinct from the Y-T coupling described for prototypical receiver domains. We first solved the structures of inactive and active SdrG, a representative of the FAT GUY family, and then biochemically and genetically characterized variants in which residues in this motif were mutated. Our results support a model of activation mainly driven by a conserved lysine and reveal that the rotation of the threonine induces the reorganization of several aromatic residues in and around the PFXFATG[G/Y] motif to generate intermediates resembling those occurring during classical Y-T coupling. Overall, this helps define a new subfamily of response regulators that emerge as important players in physiological adaptation.
 +
 +
Role of the PFXFATG[G/Y] Motif in the Activation of SdrG, a Response Regulator Involved in the Alphaproteobacterial General Stress Response.,Campagne S, Dintner S, Gottschlich L, Thibault M, Bortfeld-Miller M, Kaczmarczyk A, Francez-Charlot A, Allain FH, Vorholt JA Structure. 2016 Aug 2;24(8):1237-47. doi: 10.1016/j.str.2016.05.015. Epub 2016, Jul 7. PMID:27396826<ref>PMID:27396826</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 5ieb" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Allain, F H.T]]
+
[[Category: Large Structures]]
-
[[Category: Campagne, S]]
+
[[Category: Sphingomonas melonis FR1]]
-
[[Category: Vorholt, J A]]
+
[[Category: Allain FH-T]]
-
[[Category: Protein]]
+
[[Category: Campagne S]]
-
[[Category: Single domain response regulator fat guy familly]]
+
[[Category: Vorholt JA]]

Current revision

Solution structure of SdrG from Sphingomonas melonis Fr1

PDB ID 5ieb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools