This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5gkw
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==crystal structure of SZ529 complex with (R,R)-cyclopentanediol== | |
| + | <StructureSection load='5gkw' size='340' side='right'caption='[[5gkw]], [[Resolution|resolution]] 2.01Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5gkw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_erythropolis Rhodococcus erythropolis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GKW FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6VV:(1~{R},2~{R})-cyclopentane-1,2-diol'>6VV</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gkw OCA], [https://pdbe.org/5gkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gkw RCSB], [https://www.ebi.ac.uk/pdbsum/5gkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gkw ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/LIMA_RHOER LIMA_RHOER] Catalyzes the conversion of limonene-1,2-epoxide to limonene-1,2-diol. Can use both the (-) and (+) isomers of limonene-1,2-epoxide as substrates and also has some activity with 1-methylcyclohexene oxide, cyclohexene oxide and indene oxide as substrates. | ||
| - | + | ==See Also== | |
| - | + | *[[Epoxide hydrolase 3D structures|Epoxide hydrolase 3D structures]] | |
| - | + | __TOC__ | |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Rhodococcus erythropolis]] |
| - | [[Category: | + | [[Category: Reetz MT]] |
| - | [[Category: | + | [[Category: Sun ZT]] |
| + | [[Category: Wu L]] | ||
| + | [[Category: Zhou JH]] | ||
Current revision
crystal structure of SZ529 complex with (R,R)-cyclopentanediol
| |||||||||||
