5l7i
From Proteopedia
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==Structure of human Smoothened in complex with Vismodegib== | ==Structure of human Smoothened in complex with Vismodegib== | ||
- | <StructureSection load='5l7i' size='340' side='right' caption='[[5l7i]], [[Resolution|resolution]] 3.30Å' scene=''> | + | <StructureSection load='5l7i' size='340' side='right'caption='[[5l7i]], [[Resolution|resolution]] 3.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[5l7i]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L7I OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5l7i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L7I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5L7I FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPG:[(Z)-OCTADEC-9-ENYL]+(2R)-2,3-BIS(OXIDANYL)PROPANOATE'>MPG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=VIS:2-CHLORANYL-~{N}-(4-CHLORANYL-3-PYRIDIN-2-YL-PHENYL)-4-METHYLSULFONYL-BENZAMIDE'>VIS</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPG:[(Z)-OCTADEC-9-ENYL]+(2R)-2,3-BIS(OXIDANYL)PROPANOATE'>MPG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=VIS:2-CHLORANYL-~{N}-(4-CHLORANYL-3-PYRIDIN-2-YL-PHENYL)-4-METHYLSULFONYL-BENZAMIDE'>VIS</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5l7i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l7i OCA], [https://pdbe.org/5l7i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5l7i RCSB], [https://www.ebi.ac.uk/pdbsum/5l7i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5l7i ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/SMO_HUMAN SMO_HUMAN] G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO). Required for the accumulation of KIF7 and GLI3 in the cilia.<ref>PMID:19592253</ref> [https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Byrne | + | [[Category: Escherichia coli]] |
- | [[Category: Covey | + | [[Category: Homo sapiens]] |
- | [[Category: Hedger | + | [[Category: Large Structures]] |
- | [[Category: Luchetti | + | [[Category: Byrne EXB]] |
- | [[Category: Miller | + | [[Category: Covey DF]] |
- | [[Category: Mydock-McGrane | + | [[Category: Hedger G]] |
- | [[Category: Nachtergaele | + | [[Category: Luchetti G]] |
- | [[Category: Newstead | + | [[Category: Miller PS]] |
- | [[Category: Rambo | + | [[Category: Mydock-McGrane L]] |
- | [[Category: Rohatgi | + | [[Category: Nachtergaele S]] |
- | [[Category: Sansom | + | [[Category: Newstead S]] |
- | [[Category: Siebold | + | [[Category: Rambo RF]] |
- | [[Category: Sircar | + | [[Category: Rohatgi R]] |
- | [[Category: Tully | + | [[Category: Sansom MSP]] |
- | + | [[Category: Siebold C]] | |
- | + | [[Category: Sircar R]] | |
- | + | [[Category: Tully MD]] | |
- | + | ||
- | + |
Current revision
Structure of human Smoothened in complex with Vismodegib
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Categories: Escherichia coli | Homo sapiens | Large Structures | Byrne EXB | Covey DF | Hedger G | Luchetti G | Miller PS | Mydock-McGrane L | Nachtergaele S | Newstead S | Rambo RF | Rohatgi R | Sansom MSP | Siebold C | Sircar R | Tully MD