2n6t
From Proteopedia
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==NMR Assignment and NMR Structure of CssA3 (top stem) of CssA thermometer== | ==NMR Assignment and NMR Structure of CssA3 (top stem) of CssA thermometer== | ||
- | <StructureSection load='2n6t' size='340' side='right' caption='[[2n6t | + | <StructureSection load='2n6t' size='340' side='right'caption='[[2n6t]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2n6t]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2N6T OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[2n6t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2N6T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2N6T FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2n6t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2n6t OCA], [https://pdbe.org/2n6t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2n6t RCSB], [https://www.ebi.ac.uk/pdbsum/2n6t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2n6t ProSAT]</span></td></tr> |
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Neisseria meningitidis causes bacterial meningitis and septicemia. It evades the host complement system by upregulating expression of immune evasion factors in response to changes in temperature. RNA thermometers within mRNAs control expression of bacterial immune evasion factors, including CssA, in the 5'-untranslated region of the operon for capsule biosynthesis. We dissect the molecular mechanisms of thermoregulation and report the structure of the CssA thermometer. We show that the RNA thermometer acts as a rheostat, whose stability is optimized to respond in a small temperature range around 37 degrees C as occur within the upper airways during infection. Small increases in temperature gradually open up the structure to allow progressively increased access to the ribosome binding site. Even small changes in stability induced by mutations of imperfect base pairs, as in naturally occurring polymorphisms, shift the thermometer response outside of the desired temperature range, suggesting that its activity could be modulated by pharmacological intervention. | ||
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- | Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis.,Barnwal RP, Loh E, Godin KS, Yip J, Lavender H, Tang CM, Varani G Nucleic Acids Res. 2016 Jul 1. pii: gkw584. PMID:27369378<ref>PMID:27369378</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 2n6t" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Neisseria meningitidis]] |
- | [[Category: | + | [[Category: Barnwal R]] |
- | [[Category: | + | [[Category: Godin K]] |
- | [[Category: | + | [[Category: Varani G]] |
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Current revision
NMR Assignment and NMR Structure of CssA3 (top stem) of CssA thermometer
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