5ghe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:12, 20 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal Structure of Bacillus thuringiensis Cry6Aa2 Protoxin==
==Crystal Structure of Bacillus thuringiensis Cry6Aa2 Protoxin==
-
<StructureSection load='5ghe' size='340' side='right' caption='[[5ghe]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='5ghe' size='340' side='right'caption='[[5ghe]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ghe]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GHE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GHE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ghe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_thuringiensis Bacillus thuringiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GHE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GHE FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ghe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ghe OCA], [http://pdbe.org/5ghe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ghe RCSB], [http://www.ebi.ac.uk/pdbsum/5ghe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ghe ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.901&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ghe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ghe OCA], [https://pdbe.org/5ghe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ghe RCSB], [https://www.ebi.ac.uk/pdbsum/5ghe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ghe ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CR6AA_BACTU CR6AA_BACTU]] Endotoxin with nematicidal activity.
+
[https://www.uniprot.org/uniprot/CR6AA_BACTU CR6AA_BACTU] Endotoxin with nematicidal activity.
-
<div style="background-color:#fffaf0;">
+
-
== Publication Abstract from PubMed ==
+
-
Crystal (Cry) proteins from Bacillus thuringiensis (Bt) are globally used in agriculture as proteinaceous insecticides. Numerous crystal structures have been determined, and most exhibit conserved three-dimensional architectures. Recently, we have identified a novel nematicidal mechanism by which Cry6Aa triggers cell death through a necrosis-signaling pathway via an interaction with the host protease ASP-1. However, we found little sequence conservation of Cry6Aa in our functional study. Here, we report the 1.90 angstrom (A) resolution structure of the proteolytic form of Cry6Aa (1-396), determined by X-ray crystallography. The structure of Cry6Aa is highly similar to those of the pathogenic toxin family of ClyA-type alpha-pore-forming toxins (alpha-PFTs), which are characterized by a bipartite structure comprising a head domain and a tail domain, thus suggesting that Cry6Aa exhibits a previously undescribed nematicidal mode of action. This structure also provides a framework for the functional study of other nematicidal toxins.
+
-
Crystal structure of Cry6Aa: A novel nematicidal ClyA-type alpha-pore-forming toxin from Bacillus thuringiensis.,Huang J, Guan Z, Wan L, Zou T, Sun M Biochem Biophys Res Commun. 2016 Jul 2. pii: S0006-291X(16)31118-4. doi:, 10.1016/j.bbrc.2016.07.002. PMID:27381865<ref>PMID:27381865</ref>
+
==See Also==
-
 
+
*[[Delta-endotoxin|Delta-endotoxin]]
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
*[[Pesticidal crystal protein|Pesticidal crystal protein]]
-
</div>
+
-
<div class="pdbe-citations 5ghe" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Guan, Z]]
 
-
[[Category: Huang, J]]
 
-
[[Category: Sun, M]]
 
-
[[Category: Yin, P]]
 
-
[[Category: Zou, T]]
 
[[Category: Bacillus thuringiensis]]
[[Category: Bacillus thuringiensis]]
-
[[Category: Clya-type]]
+
[[Category: Large Structures]]
-
[[Category: Cry6aa2]]
+
[[Category: Guan Z]]
-
[[Category: Toxin]]
+
[[Category: Huang J]]
 +
[[Category: Sun M]]
 +
[[Category: Yin P]]
 +
[[Category: Zou T]]

Current revision

Crystal Structure of Bacillus thuringiensis Cry6Aa2 Protoxin

PDB ID 5ghe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools