4lvp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:22, 1 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of IFT81 N-terminal domain==
==Crystal structure of IFT81 N-terminal domain==
-
<StructureSection load='4lvp' size='340' side='right' caption='[[4lvp]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
+
<StructureSection load='4lvp' size='340' side='right'caption='[[4lvp]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4lvp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlre Chlre]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LVP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LVP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4lvp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LVP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TA0:TANTALUM'>TA0</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.323&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4lvr|4lvr]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TA0:TANTALUM'>TA0</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">IFT81, CHLREDRAFT_138649 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3055 CHLRE])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lvp OCA], [https://pdbe.org/4lvp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lvp RCSB], [https://www.ebi.ac.uk/pdbsum/4lvp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lvp ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lvp OCA], [http://pdbe.org/4lvp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lvp RCSB], [http://www.ebi.ac.uk/pdbsum/4lvp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lvp ProSAT]</span></td></tr>
+
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/IFT81_CHLRE IFT81_CHLRE] Component of the intraflagellar transport (IFT) complex B: together with IFT74, forms a tubulin-binding module that specifically mediates transport of tubulin within the cilium. Binds tubulin via its CH (calponin-homology)-like region. Required for ciliogenesis.<ref>PMID:23990561</ref>
-
Intraflagellar transport (IFT) of ciliary precursors such as tubulin from the cytoplasm to the ciliary tip is involved in the construction of the cilium, a hairlike organelle found on most eukaryotic cells. However, the molecular mechanisms of IFT are poorly understood. Here, we found that the two core IFT proteins IFT74 and IFT81 form a tubulin-binding module and mapped the interaction to a calponin homology domain of IFT81 and a highly basic domain in IFT74. Knockdown of IFT81 and rescue experiments with point mutants showed that tubulin binding by IFT81 was required for ciliogenesis in human cells.
+
-
 
+
-
Molecular basis of tubulin transport within the cilium by IFT74 and IFT81.,Bhogaraju S, Cajanek L, Fort C, Blisnick T, Weber K, Taschner M, Mizuno N, Lamla S, Bastin P, Nigg EA, Lorentzen E Science. 2013 Aug 30;341(6149):1009-12. doi: 10.1126/science.1240985. PMID:23990561<ref>PMID:23990561</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 4lvp" style="background-color:#fffaf0;"></div>
+
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chlre]]
+
[[Category: Chlamydomonas reinhardtii]]
-
[[Category: Bhogaraju, S]]
+
[[Category: Large Structures]]
-
[[Category: Ch domain]]
+
[[Category: Bhogaraju S]]
-
[[Category: Transport protein]]
+
-
[[Category: Tubulin/microtubule]]
+

Current revision

Crystal structure of IFT81 N-terminal domain

PDB ID 4lvp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools