3mtc
From Proteopedia
(Difference between revisions)
(One intermediate revision not shown.) | |||
Line 1: | Line 1: | ||
==Crystal Structure of INPP5B in complex with phosphatidylinositol 4-phosphate== | ==Crystal Structure of INPP5B in complex with phosphatidylinositol 4-phosphate== | ||
- | <StructureSection load='3mtc' size='340' side='right' caption='[[3mtc]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='3mtc' size='340' side='right'caption='[[3mtc]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3mtc]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3mtc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MTC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MTC FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PIF:(2R)-3-{[(S)-HYDROXY{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-TETRAHYDROXY-4-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1,2-DIYL+DIOCTANOATE'>PIF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PIF:(2R)-3-{[(S)-HYDROXY{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-TETRAHYDROXY-4-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1,2-DIYL+DIOCTANOATE'>PIF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mtc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mtc OCA], [https://pdbe.org/3mtc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mtc RCSB], [https://www.ebi.ac.uk/pdbsum/3mtc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mtc ProSAT]</span></td></tr> | |
- | + | ||
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/I5P2_HUMAN I5P2_HUMAN] Hydrolyzes phosphatidylinositol 4,5-bisphosphate (PtIns(4,5)P2) and the signaling molecule phosphatidylinositol 1,4,5-trisphosphate (PtIns(1,4,5)P3), and thereby modulates cellular signaling events.<ref>PMID:7721860</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mt/3mtc_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mt/3mtc_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Line 34: | Line 32: | ||
==See Also== | ==See Also== | ||
*[[Phosphoinositide phosphatase|Phosphoinositide phosphatase]] | *[[Phosphoinositide phosphatase|Phosphoinositide phosphatase]] | ||
+ | *[[3D structures of inositol polyphosphate 5-phosphatase OCRL|3D structures of inositol polyphosphate 5-phosphatase OCRL]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Arrowsmith | + | [[Category: Arrowsmith CH]] |
- | + | [[Category: Berglund H]] | |
- | [[Category: Berglund | + | [[Category: Bountra C]] |
- | [[Category: Bountra | + | [[Category: Collins R]] |
- | [[Category: Collins | + | [[Category: Edwards AM]] |
- | [[Category: Edwards | + | [[Category: Flodin S]] |
- | [[Category: Flodin | + | [[Category: Flores A]] |
- | [[Category: Flores | + | [[Category: Graslund S]] |
- | [[Category: Graslund | + | [[Category: Hammarstrom M]] |
- | [[Category: Hammarstrom | + | [[Category: Johansson I]] |
- | [[Category: Johansson | + | [[Category: Karlberg T]] |
- | [[Category: Karlberg | + | [[Category: Kol S]] |
- | [[Category: Kol | + | [[Category: Kotenyova T]] |
- | [[Category: Kotenyova | + | [[Category: Moche M]] |
- | [[Category: Moche | + | [[Category: Nordlund P]] |
- | [[Category: Nordlund | + | [[Category: Nyman T]] |
- | [[Category: Nyman | + | [[Category: Persson C]] |
- | [[Category: Persson | + | [[Category: Schuler H]] |
- | + | [[Category: Schutz P]] | |
- | [[Category: Schuler | + | [[Category: Siponen MI]] |
- | [[Category: Schutz | + | [[Category: Thorsell AG]] |
- | [[Category: Siponen | + | [[Category: Tresaugues L]] |
- | [[Category: Thorsell | + | [[Category: Wahlberg E]] |
- | [[Category: Tresaugues | + | [[Category: Weigelt J]] |
- | [[Category: Wahlberg | + | [[Category: Welin M]] |
- | [[Category: Weigelt | + | [[Category: Wisniewska M]] |
- | [[Category: Welin | + | [[Category: Van der Berg S]] |
- | [[Category: Wisniewska | + | |
- | [[Category: | + | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + |
Current revision
Crystal Structure of INPP5B in complex with phosphatidylinositol 4-phosphate
|
Categories: Homo sapiens | Large Structures | Arrowsmith CH | Berglund H | Bountra C | Collins R | Edwards AM | Flodin S | Flores A | Graslund S | Hammarstrom M | Johansson I | Karlberg T | Kol S | Kotenyova T | Moche M | Nordlund P | Nyman T | Persson C | Schuler H | Schutz P | Siponen MI | Thorsell AG | Tresaugues L | Wahlberg E | Weigelt J | Welin M | Wisniewska M | Van der Berg S