3tnj

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==Crystal structure of universal stress protein from Nitrosomonas europaea with AMP bound==
==Crystal structure of universal stress protein from Nitrosomonas europaea with AMP bound==
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<StructureSection load='3tnj' size='340' side='right' caption='[[3tnj]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='3tnj' size='340' side='right'caption='[[3tnj]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3tnj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Niteu Niteu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TNJ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3tnj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea_ATCC_19718 Nitrosomonas europaea ATCC 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TNJ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2pfs|2pfs]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NE1028 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=228410 NITEU])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tnj OCA], [https://pdbe.org/3tnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tnj RCSB], [https://www.ebi.ac.uk/pdbsum/3tnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tnj ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tnj OCA], [http://pdbe.org/3tnj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3tnj RCSB], [http://www.ebi.ac.uk/pdbsum/3tnj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3tnj ProSAT]</span></td></tr>
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</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/Q82VN8_NITEU Q82VN8_NITEU]
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We present the crystal structures of two universal stress proteins (USP) from Archaeoglobus fulgidus and Nitrosomonas europaea in both apo- and ligand-bound forms. This work is the first complete synthesis of the structural properties of 26 USP available in the Protein Data Bank, over 75% of which were determined by structure genomics centers with no additional information provided. The results of bioinformatic analyses of all available USP structures and their sequence homologs revealed that these two new USP structures share overall structural similarity with structures of USPs previously determined. Clustering and cladogram analyses, however, show how they diverge from other members of the USP superfamily and show greater similarity to USPs from organisms inhabiting extreme environments. We compared them with other archaeal and bacterial USPs and discuss their similarities and differences in context of structure, sequential motifs, and potential function. We also attempted to group all analyzed USPs into families, so that assignment of the potential function to those with no experimental data available would be possible by extrapolation.
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Structural and functional insight into the universal stress protein family.,Tkaczuk KL, A Shumilin I, Chruszcz M, Evdokimova E, Savchenko A, Minor W Evol Appl. 2013 Apr;6(3):434-49. doi: 10.1111/eva.12057. Epub 2013 Mar 13. PMID:23745136<ref>PMID:23745136</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3tnj" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Niteu]]
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[[Category: Large Structures]]
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[[Category: Chruszcz, M]]
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[[Category: Nitrosomonas europaea ATCC 19718]]
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[[Category: Edwards, A]]
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[[Category: Chruszcz M]]
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[[Category: Evdokimova, E]]
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[[Category: Edwards A]]
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[[Category: Joachimiak, A]]
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[[Category: Evdokimova E]]
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[[Category: Kagan, O]]
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[[Category: Joachimiak A]]
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[[Category: Structural genomic]]
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[[Category: Kagan O]]
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[[Category: Minor, W]]
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[[Category: Minor W]]
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[[Category: Savchenko, A]]
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[[Category: Savchenko A]]
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[[Category: Shumilin, I A]]
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[[Category: Shumilin IA]]
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[[Category: Tkaczuk, K L]]
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[[Category: Tkaczuk KL]]
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[[Category: Chaperone]]
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[[Category: Mcsg]]
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[[Category: Psi-biology]]
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[[Category: Universal stress protein]]
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Current revision

Crystal structure of universal stress protein from Nitrosomonas europaea with AMP bound

PDB ID 3tnj

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