This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4gzb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:03, 8 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of native AmpC beta-lactamase from Pseudomonas aeruginosa PAO1==
==Crystal structure of native AmpC beta-lactamase from Pseudomonas aeruginosa PAO1==
-
<StructureSection load='4gzb' size='340' side='right' caption='[[4gzb]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+
<StructureSection load='4gzb' size='340' side='right'caption='[[4gzb]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4gzb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GZB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4gzb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GZB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GZB FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4hbt|4hbt]], [[4hbu|4hbu]], [[4hef|4hef]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ampC, blaAmpC, PA4110 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gzb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzb OCA], [https://pdbe.org/4gzb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gzb RCSB], [https://www.ebi.ac.uk/pdbsum/4gzb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gzb ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gzb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gzb OCA], [http://pdbe.org/4gzb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4gzb RCSB], [http://www.ebi.ac.uk/pdbsum/4gzb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4gzb ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AMPC_PSEAE AMPC_PSEAE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 21:
==See Also==
==See Also==
-
*[[Beta-lactamase|Beta-lactamase]]
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beta-lactamase]]
+
[[Category: Large Structures]]
-
[[Category: Pseae]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Benvenuti, M]]
+
[[Category: Benvenuti M]]
-
[[Category: Docquier, J D]]
+
[[Category: De Luca F]]
-
[[Category: Luca, F De]]
+
[[Category: Docquier JD]]
-
[[Category: Mangani, S]]
+
[[Category: Mangani S]]
-
[[Category: Antibiotic resistance]]
+
-
[[Category: Beta-lactamase fold]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal structure of native AmpC beta-lactamase from Pseudomonas aeruginosa PAO1

PDB ID 4gzb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools