This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3t4r
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Lettuce Necrotic Yellow Virus Phosphoprotein C-Terminal Domain== | ==Lettuce Necrotic Yellow Virus Phosphoprotein C-Terminal Domain== | ||
| - | <StructureSection load='3t4r' size='340' side='right' caption='[[3t4r]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='3t4r' size='340' side='right'caption='[[3t4r]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3t4r]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3t4r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lnyv Lnyv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T4R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T4R FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">P ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">P ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=928304 LNYV])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t4r OCA], [https://pdbe.org/3t4r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t4r RCSB], [https://www.ebi.ac.uk/pdbsum/3t4r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t4r ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/VP4A_LNYV3 VP4A_LNYV3]] Non catalytic polymerase cofactor and regulatory protein that plays a role in viral transcription and replication. Stabilizes the RNA polymerase L to the N-RNA template and binds the soluble protein N, preventing it from encapsidating non-genomic RNA (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 24: | Line 24: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Lnyv]] | [[Category: Lnyv]] | ||
[[Category: Jamin, M]] | [[Category: Jamin, M]] | ||
Current revision
Lettuce Necrotic Yellow Virus Phosphoprotein C-Terminal Domain
| |||||||||||
