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2vbk

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==NATIVE TAILSPIKE PROTEIN OF BACTERIOPHAGE SF6==
==NATIVE TAILSPIKE PROTEIN OF BACTERIOPHAGE SF6==
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<StructureSection load='2vbk' size='340' side='right' caption='[[2vbk]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
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<StructureSection load='2vbk' size='340' side='right'caption='[[2vbk]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2vbk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpsfv Bpsfv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VBK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VBK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2vbk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_virus_Sf6 Shigella virus Sf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VBK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VBK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.25&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vbe|2vbe]], [[2vbm|2vbm]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO2:CARBON+DIOXIDE'>CO2</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGR:R-1,2-PROPANEDIOL'>PGR</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vbk OCA], [http://pdbe.org/2vbk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vbk RCSB], [http://www.ebi.ac.uk/pdbsum/2vbk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vbk ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vbk OCA], [https://pdbe.org/2vbk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vbk RCSB], [https://www.ebi.ac.uk/pdbsum/2vbk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vbk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/TSPE_BPSFV TSPE_BPSFV]] Non-covalently bound to the neck of the phage capsid and mediating attachment of the viral particle to host cell-surface polysaccharide. It displays endorhamnosidase enzymatic activity, hydrolyzing the alpha-1,3-O-glycosidic linkage between rhamnose and galactose of the O-antigen polysaccharide.
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[https://www.uniprot.org/uniprot/FIBER_BPSFV FIBER_BPSFV] Non-covalently bound to the neck of the phage capsid and mediating attachment of the viral particle to host cell-surface polysaccharide. It displays endorhamnosidase enzymatic activity, hydrolyzing the alpha-1,3-O-glycosidic linkage between rhamnose and galactose of the O-antigen polysaccharide.<ref>PMID:18462681</ref> <ref>PMID:12424253</ref> <ref>PMID:6284</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 2vbk" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2vbk" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Tailspike protein 3D structures|Tailspike protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bpsfv]]
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[[Category: Large Structures]]
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[[Category: Barbirz, S]]
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[[Category: Shigella virus Sf6]]
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[[Category: Freiberg, A]]
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[[Category: Barbirz S]]
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[[Category: Heinemann, U]]
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[[Category: Freiberg A]]
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[[Category: Heinle, K]]
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[[Category: Heinemann U]]
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[[Category: Mueller, J J]]
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[[Category: Heinle K]]
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[[Category: Seckler, R]]
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[[Category: Mueller JJ]]
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[[Category: Endorhamnosidase]]
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[[Category: Seckler R]]
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[[Category: Hydrolase]]
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[[Category: Right-handed parallel beta-helix]]
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[[Category: Tailspike]]
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[[Category: Viral adhesion protein]]
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[[Category: Viral protein]]
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Current revision

NATIVE TAILSPIKE PROTEIN OF BACTERIOPHAGE SF6

PDB ID 2vbk

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