3r57
From Proteopedia
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| ==Human Cyclophilin D Complexed with a Fragment== | ==Human Cyclophilin D Complexed with a Fragment== | ||
| - | <StructureSection load='3r57' size='340' side='right' caption='[[3r57]], [[Resolution|resolution]] 1.71Å' scene=''> | + | <StructureSection load='3r57' size='340' side='right'caption='[[3r57]], [[Resolution|resolution]] 1.71Å' scene=''> | 
| == Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3r57]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3r57]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R57 FirstGlance]. <br> | 
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71Å</td></tr> | 
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=N3M:N-(3-AMINOPHENYL)ACETAMIDE'>N3M</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r57 OCA], [https://pdbe.org/3r57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r57 RCSB], [https://www.ebi.ac.uk/pdbsum/3r57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r57 ProSAT]</span></td></tr> | 
| - | < | + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
| </table> | </table> | ||
| == Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PPIF_HUMAN PPIF_HUMAN] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Involved in regulation of the mitochondrial permeability transition pore (mPTP). It is proposed that its association with the mPTP is masking a binding site for inhibiting inorganic phosphate (Pi) and promotes the open probablity of the mPTP leading to apoptosis or necrosis; the requirement of the PPIase activity for this function is debated. In cooperation with mitochondrial TP53 is involved in activating oxidative stress-induced necrosis. Involved in modulation of mitochondrial membrane F(1)F(0) ATP synthase activity and regulation of mitochondrial matrix adenine nucleotide levels. Has anti-apoptotic activity independently of mPTP and in cooperation with BCL2 inhibits cytochrome c-dependent apoptosis.<ref>PMID:19228691</ref> <ref>PMID:22726440</ref>  | 
| ==See Also== | ==See Also== | ||
| - | *[[Cyclophilin|Cyclophilin]] | + | *[[Cyclophilin 3D structures|Cyclophilin 3D structures]] | 
| == References == | == References == | ||
| <references/> | <references/> | ||
| __TOC__ | __TOC__ | ||
| </StructureSection> | </StructureSection> | ||
| - | [[Category:  | + | [[Category: Homo sapiens]] | 
| - | [[Category:  | + | [[Category: Large Structures]] | 
| - | [[Category: Ahmed-Belkacem | + | [[Category: Ahmed-Belkacem H]] | 
| - | [[Category: Bessin | + | [[Category: Bessin Y]] | 
| - | [[Category: Colliandre | + | [[Category: Colliandre L]] | 
| - | [[Category: Guichou | + | [[Category: Guichou JF]] | 
| - | [[Category: Pawlotsky | + | [[Category: Pawlotsky JM]] | 
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Current revision
Human Cyclophilin D Complexed with a Fragment
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