3qpk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:22, 6 November 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Probing oxygen channels in Melanocarpus albomyces laccase==
==Probing oxygen channels in Melanocarpus albomyces laccase==
-
<StructureSection load='3qpk' size='340' side='right' caption='[[3qpk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='3qpk' size='340' side='right'caption='[[3qpk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3qpk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Melao Melao]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QPK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QPK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3qpk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Melanocarpus_albomyces Melanocarpus albomyces]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QPK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gw0|1gw0]], [[2ih8|2ih8]], [[2ih9|2ih9]], [[2q9o|2q9o]], [[3dkh|3dkh]], [[3fu7|3fu7]], [[3fu8|3fu8]], [[3fu9|3fu9]], [[3pps|3pps]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XE:XENON'>XE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LAC1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=204285 MELAO])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qpk OCA], [https://pdbe.org/3qpk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qpk RCSB], [https://www.ebi.ac.uk/pdbsum/3qpk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qpk ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qpk OCA], [http://pdbe.org/3qpk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3qpk RCSB], [http://www.ebi.ac.uk/pdbsum/3qpk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3qpk ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LAC1_MELAO LAC1_MELAO]] Lignin degradation and detoxification of lignin-derived products (Probable).<ref>PMID:15474046</ref>
+
[https://www.uniprot.org/uniprot/LAC1_MELAO LAC1_MELAO] Lignin degradation and detoxification of lignin-derived products (Probable).<ref>PMID:15474046</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 19:
</div>
</div>
<div class="pdbe-citations 3qpk" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3qpk" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Laccase 3D structures|Laccase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Laccase]]
+
[[Category: Large Structures]]
-
[[Category: Melao]]
+
[[Category: Melanocarpus albomyces]]
-
[[Category: Hakulinen, N]]
+
[[Category: Hakulinen N]]
-
[[Category: Kallio, J P]]
+
[[Category: Kallio JP]]
-
[[Category: Rouvinen, J]]
+
[[Category: Rouvinen J]]
-
[[Category: Cu binding]]
+
-
[[Category: Multicopper oxidase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Xe binding]]
+

Current revision

Probing oxygen channels in Melanocarpus albomyces laccase

PDB ID 3qpk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools