3wgv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (02:36, 21 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of a Na+-bound Na+,K+-ATPase preceding the E1P state with oligomycin==
==Crystal structure of a Na+-bound Na+,K+-ATPase preceding the E1P state with oligomycin==
-
<StructureSection load='3wgv' size='340' side='right' caption='[[3wgv]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='3wgv' size='340' side='right'caption='[[3wgv]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3wgv]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WGV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WGV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3wgv]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WGV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=EFO:OLIGOMYCIN+A'>EFO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PC1:1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE'>PC1</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2zxe|2zxe]], [[2zbd|2zbd]], [[3wgu|3wgu]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=CLR:CHOLESTEROL'>CLR</scene>, <scene name='pdbligand=EFO:OLIGOMYCIN+A'>EFO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PC1:1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE'>PC1</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sodium/potassium-exchanging_ATPase Sodium/potassium-exchanging ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.9 3.6.3.9] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wgv OCA], [https://pdbe.org/3wgv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wgv RCSB], [https://www.ebi.ac.uk/pdbsum/3wgv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wgv ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wgv OCA], [http://pdbe.org/3wgv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3wgv RCSB], [http://www.ebi.ac.uk/pdbsum/3wgv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3wgv ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/AT1B1_PIG AT1B1_PIG]] This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.
+
[https://www.uniprot.org/uniprot/AT1A1_PIG AT1A1_PIG] This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients.
==See Also==
==See Also==
-
*[[ATPase|ATPase]]
+
*[[ATPase 3D structures|ATPase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Sodium/potassium-exchanging ATPase]]
+
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Cornelius, F]]
+
[[Category: Cornelius F]]
-
[[Category: Kanai, R]]
+
[[Category: Kanai R]]
-
[[Category: Ogawa, H]]
+
[[Category: Ogawa H]]
-
[[Category: Toyoshima, C]]
+
[[Category: Toyoshima C]]
-
[[Category: Vilsen, B]]
+
[[Category: Vilsen B]]
-
[[Category: Atp-binding]]
+
-
[[Category: Atpase]]
+
-
[[Category: Haloacid dehydrogenease superfamily]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Hydrolase-transport protein-antibiotic complex]]
+
-
[[Category: Ion pump]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Na+ binding]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Phosphate analogue]]
+
-
[[Category: Phosphoprotein]]
+

Current revision

Crystal structure of a Na+-bound Na+,K+-ATPase preceding the E1P state with oligomycin

PDB ID 3wgv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools