4jdu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:59, 26 March 2025) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines.==
==The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines.==
-
<StructureSection load='4jdu' size='340' side='right' caption='[[4jdu]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
+
<StructureSection load='4jdu' size='340' side='right'caption='[[4jdu]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4jdu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JDU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JDU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4jdu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JDU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JDU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.47&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">batB, BF2500, BF9343_2419 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jdu OCA], [https://pdbe.org/4jdu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jdu RCSB], [https://www.ebi.ac.uk/pdbsum/4jdu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jdu ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jdu OCA], [http://pdbe.org/4jdu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jdu RCSB], [http://www.ebi.ac.uk/pdbsum/4jdu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jdu ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5LCG5_BACFN Q5LCG5_BACFN]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacfn]]
+
[[Category: Bacteroides fragilis NCTC 9343]]
-
[[Category: Bearden, J]]
+
[[Category: Large Structures]]
-
[[Category: Bigelow, L]]
+
[[Category: Bearden J]]
-
[[Category: Fan, Y]]
+
[[Category: Bigelow L]]
-
[[Category: Joachimiak, A]]
+
[[Category: Fan Y]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Tan, K]]
+
[[Category: Tan K]]
-
[[Category: Mcsg]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+

Current revision

The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines.

PDB ID 4jdu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools