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| ==Bacillus amyloliquefaciens CBM33== | | ==Bacillus amyloliquefaciens CBM33== |
- | <StructureSection load='2yow' size='340' side='right' caption='[[2yow]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='2yow' size='340' side='right'caption='[[2yow]], [[Resolution|resolution]] 1.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2yow]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_amyloliquifaciens"_(sic)_fukumoto_1943 "bacillus amyloliquifaciens" (sic) fukumoto 1943]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YOW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YOW FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2yow]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YOW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YOW FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yox|2yox]], [[2yoy|2yoy]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yow OCA], [http://pdbe.org/2yow PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yow RCSB], [http://www.ebi.ac.uk/pdbsum/2yow PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yow ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yow OCA], [https://pdbe.org/2yow PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yow RCSB], [https://www.ebi.ac.uk/pdbsum/2yow PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yow ProSAT]</span></td></tr> |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Davies, G J]] | + | [[Category: Bacillus amyloliquefaciens]] |
- | [[Category: Hemsworth, G R]] | + | [[Category: Large Structures]] |
- | [[Category: Kim, R Q]] | + | [[Category: Davies GJ]] |
- | [[Category: Lewis, S J]] | + | [[Category: Hemsworth GR]] |
- | [[Category: Taylor, E J]] | + | [[Category: Kim RQ]] |
- | [[Category: Turkenburg, J P]] | + | [[Category: Lewis SJ]] |
- | [[Category: Walton, P H]] | + | [[Category: Taylor EJ]] |
- | [[Category: Cellulose degradation]] | + | [[Category: Turkenburg JP]] |
- | [[Category: Cellulose oxidation]] | + | [[Category: Walton PH]] |
- | [[Category: Gh61]]
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- | [[Category: Oxidoreductase]]
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| Structural highlights
Publication Abstract from PubMed
The capacity of metal-dependent fungal and bacterial polysaccharide oxygenases, termed GH61 and CBM33 respectively, to potentiate the enzymatic degradation of cellulose opens up new possibilities for the conversion of recalcitrant biomass to biofuels. GH61s have already been shown to be unique metalloenzymes containing an active site with a mononuclear copper ion coordinated by two histidines, one of which is an unusual -N methylated N-terminal histidine. We now report the structural and spectroscopic characterization of the corresponding copper CBM33 enzymes. CBM33 binds copper with high affinity at a mononuclear site, significantly stabilizing the enzyme. X-band EPR spectroscopy of Cu(II)-CBM33 shows a mononuclear type 2 copper site with the copper ion in with a distorted axial coordination sphere, into which azide will coordinate as evidenced by the concomitant formation of a new absorption band in the UV/vis spectrum at 390 nm. The enzyme's three-dimensional structure contains copper which has been photo-reduced to Cu(I) by the incident X-rays, confirmed by x-ray absorption/fluorescence studies of both aqueous solution and intact crystals of Cu-CBM33. The single copper(I) ion is ligated in a T-shaped configuration by three nitrogen atoms from two histidine side chains and the amino terminus, similar to the endogenous copper coordination geometry found in fungal GH61.
The copper active site of CBM33 polysaccharide oxygenases.,Hemsworth GR, Taylor E, Kim RQ, Gregory RC, Lewis SJ, Turkenburg JP, Parkin A, Davies GJ, Walton PH J Am Chem Soc. 2013 Mar 29. PMID:23540833[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Hemsworth GR, Taylor E, Kim RQ, Gregory RC, Lewis SJ, Turkenburg JP, Parkin A, Davies GJ, Walton PH. The copper active site of CBM33 polysaccharide oxygenases. J Am Chem Soc. 2013 Mar 29. PMID:23540833 doi:http://dx.doi.org/10.1021/ja402106e
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