1le0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:48, 29 November 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1le0.jpg|left|200px]]
 
-
{{Structure
+
==NMR structure of Tryptophan Zipper 1: a stable, monomeric beta-hairpin with a type II' turn==
-
|PDB= 1le0 |SIZE=350|CAPTION= <scene name='initialview01'>1le0</scene>
+
<StructureSection load='1le0' size='340' side='right'caption='[[1le0]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>
+
<table><tr><td colspan='2'>[[1le0]] is a 1 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1hrw 1hrw]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LE0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LE0 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1le0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1le0 OCA], [https://pdbe.org/1le0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1le0 RCSB], [https://www.ebi.ac.uk/pdbsum/1le0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1le0 ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[1le1|1LE1]], [[1le3|1LE3]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1le0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1le0 OCA], [http://www.ebi.ac.uk/pdbsum/1le0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1le0 RCSB]</span>
+
<div style="background-color:#fffaf0;">
-
}}
+
== Publication Abstract from PubMed ==
-
 
+
-
'''NMR structure of Tryptophan Zipper 1: a stable, monomeric beta-hairpin with a type II' turn'''
+
-
 
+
-
 
+
-
==Overview==
+
A structural motif, the tryptophan zipper (trpzip), greatly stabilizes the beta-hairpin conformation in short peptides. Peptides (12 or 16 aa in length) with four different turn sequences are monomeric and fold cooperatively in water, as has been observed previously for some hairpin peptides. However, the folding free energies of the trpzips exceed substantially those of all previously reported beta-hairpins and even those of some larger designed proteins. NMR structures of three of the trpzip peptides reveal exceptionally well-defined beta-hairpin conformations stabilized by cross-strand pairs of indole rings. The trpzips are the smallest peptides to adopt an unique tertiary fold without requiring metal binding, unusual amino acids, or disulfide crosslinks.
A structural motif, the tryptophan zipper (trpzip), greatly stabilizes the beta-hairpin conformation in short peptides. Peptides (12 or 16 aa in length) with four different turn sequences are monomeric and fold cooperatively in water, as has been observed previously for some hairpin peptides. However, the folding free energies of the trpzips exceed substantially those of all previously reported beta-hairpins and even those of some larger designed proteins. NMR structures of three of the trpzip peptides reveal exceptionally well-defined beta-hairpin conformations stabilized by cross-strand pairs of indole rings. The trpzips are the smallest peptides to adopt an unique tertiary fold without requiring metal binding, unusual amino acids, or disulfide crosslinks.
-
==About this Structure==
+
Tryptophan zippers: stable, monomeric beta -hairpins.,Cochran AG, Skelton NJ, Starovasnik MA Proc Natl Acad Sci U S A. 2001 May 8;98(10):5578-83. Epub 2001 May 1. PMID:11331745<ref>PMID:11331745</ref>
-
1LE0 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. This structure supersedes the now removed PDB entry 1HRW. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LE0 OCA].
+
-
 
+
-
==Reference==
+
-
Tryptophan zippers: stable, monomeric beta -hairpins., Cochran AG, Skelton NJ, Starovasnik MA, Proc Natl Acad Sci U S A. 2001 May 8;98(10):5578-83. Epub 2001 May 1. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11331745 11331745]
+
-
[[Category: Protein complex]]
+
-
[[Category: Cochran, A G.]]
+
-
[[Category: Skelton, N J.]]
+
-
[[Category: Starovasnik, M A.]]
+
-
[[Category: beta-hairpin]]
+
-
[[Category: type ii' turn]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:01:39 2008''
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 1le0" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Cochran AG]]
 +
[[Category: Skelton NJ]]
 +
[[Category: Starovasnik MA]]

Current revision

NMR structure of Tryptophan Zipper 1: a stable, monomeric beta-hairpin with a type II' turn

PDB ID 1le0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools