|
|
(One intermediate revision not shown.) |
Line 1: |
Line 1: |
| | | |
| ==Crystal structure of human serpinB1 mutant== | | ==Crystal structure of human serpinB1 mutant== |
- | <StructureSection load='4ga7' size='340' side='right' caption='[[4ga7]], [[Resolution|resolution]] 2.90Å' scene=''> | + | <StructureSection load='4ga7' size='340' side='right'caption='[[4ga7]], [[Resolution|resolution]] 2.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4ga7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GA7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GA7 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4ga7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GA7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GA7 FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4gaw|4gaw]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SERPINB1, ELANH2, MNEI, PI2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ga7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ga7 OCA], [https://pdbe.org/4ga7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ga7 RCSB], [https://www.ebi.ac.uk/pdbsum/4ga7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ga7 ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ga7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ga7 OCA], [http://pdbe.org/4ga7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ga7 RCSB], [http://www.ebi.ac.uk/pdbsum/4ga7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ga7 ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/ILEU_HUMAN ILEU_HUMAN]] Regulates the activity of the neutrophil proteases elastase, cathepsin G, proteinase-3, chymase, chymotrypsin, and kallikrein-3. Also functions as a potent intracellular inhibitor of granzyme H.<ref>PMID:11747453</ref> | + | [https://www.uniprot.org/uniprot/ILEU_HUMAN ILEU_HUMAN] Regulates the activity of the neutrophil proteases elastase, cathepsin G, proteinase-3, chymase, chymotrypsin, and kallikrein-3. Also functions as a potent intracellular inhibitor of granzyme H.<ref>PMID:11747453</ref> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
Line 21: |
Line 20: |
| | | |
| ==See Also== | | ==See Also== |
- | *[[Serpin|Serpin]] | + | *[[Serpin 3D structures|Serpin 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Human]] | + | [[Category: Homo sapiens]] |
- | [[Category: Fan, Z]] | + | [[Category: Large Structures]] |
- | [[Category: Li, Q]] | + | [[Category: Fan Z]] |
- | [[Category: Sun, F]] | + | [[Category: Li Q]] |
- | [[Category: Tong, L]] | + | [[Category: Sun F]] |
- | [[Category: Wang, L]] | + | [[Category: Tong L]] |
- | [[Category: Wu, L]] | + | [[Category: Wang L]] |
- | [[Category: Zhang, K]] | + | [[Category: Wu L]] |
- | [[Category: Cathepsin g inhibitor]]
| + | [[Category: Zhang K]] |
- | [[Category: Chymase inhibitor]]
| + | |
- | [[Category: Chymotrypsin inhibitor]]
| + | |
- | [[Category: Conformational change]]
| + | |
- | [[Category: Hydrolase inhibitor]]
| + | |
- | [[Category: Serine protease inhibitor]]
| + | |
- | [[Category: Serpin]]
| + | |
| Structural highlights
Function
ILEU_HUMAN Regulates the activity of the neutrophil proteases elastase, cathepsin G, proteinase-3, chymase, chymotrypsin, and kallikrein-3. Also functions as a potent intracellular inhibitor of granzyme H.[1]
Publication Abstract from PubMed
The granzyme/perforin pathway is a major mechanism for cytotoxic lymphocytes to eliminate virus-infected and tumor cells. The balance between activation and inhibition of the proteolytic cascade must be tightly controlled to avoid self damage. Granzyme H (GzmH) is constitutively expressed in NK cells and induces target cell death; however, how GzmH activity is regulated remains elusive. We reported earlier the crystal structures of inactive D102N-GzmH alone and in complex with its synthetic substrate and inhibitor, as well as defined the mechanisms of substrate recognition and enzymatic activation. In this study, we identified SERPINB1 as a potent intracellular inhibitor for GzmH. Upon cleavage of the reactive center loop at Phe(343), SERPINB1 forms an SDS-stable covalent complex with GzmH. SERPINB1 overexpression suppresses GzmH- or LAK cell-mediated cytotoxicity. We determined the crystal structures of active GzmH and SERPINB1 (LM-DD mutant) in the native conformation to 3.0- and 2.9-A resolution, respectively. Molecular modeling reveals the possible conformational changes in GzmH for the suicide inhibition. Our findings provide new insights into the inhibitory mechanism of SERPINB1 against human GzmH.
Identification of SERPINB1 As a Physiological Inhibitor of Human Granzyme H.,Wang L, Li Q, Wu L, Liu S, Zhang Y, Yang X, Zhu P, Zhang H, Zhang K, Lou J, Liu P, Tong L, Sun F, Fan Z J Immunol. 2012 Dec 26. PMID:23269243[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Cooley J, Takayama TK, Shapiro SD, Schechter NM, Remold-O'Donnell E. The serpin MNEI inhibits elastase-like and chymotrypsin-like serine proteases through efficient reactions at two active sites. Biochemistry. 2001 Dec 25;40(51):15762-70. PMID:11747453
- ↑ Wang L, Li Q, Wu L, Liu S, Zhang Y, Yang X, Zhu P, Zhang H, Zhang K, Lou J, Liu P, Tong L, Sun F, Fan Z. Identification of SERPINB1 As a Physiological Inhibitor of Human Granzyme H. J Immunol. 2012 Dec 26. PMID:23269243 doi:10.4049/jimmunol.1202542
|