This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3alt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:30, 1 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of CEL-IV complexed with Melibiose==
==Crystal structure of CEL-IV complexed with Melibiose==
-
<StructureSection load='3alt' size='340' side='right' caption='[[3alt]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='3alt' size='340' side='right'caption='[[3alt]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3alt]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Cucumaria_echinata Cucumaria echinata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ALT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ALT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3alt]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cucumaria_echinata Cucumaria echinata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ALT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ALT FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MLB:6-O-ALPHA-D-GALACTOPYRANOSYL-ALPHA-D-GLUCOPYRANOSE'>MLB</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3als|3als]], [[3alu|3alu]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900037:alpha-melibiose'>PRD_900037</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3alt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3alt OCA], [http://pdbe.org/3alt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3alt RCSB], [http://www.ebi.ac.uk/pdbsum/3alt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3alt ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3alt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3alt OCA], [https://pdbe.org/3alt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3alt RCSB], [https://www.ebi.ac.uk/pdbsum/3alt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3alt ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7M4F9_CUCEC Q7M4F9_CUCEC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Cucumaria echinata]]
[[Category: Cucumaria echinata]]
-
[[Category: Goda, S]]
+
[[Category: Large Structures]]
-
[[Category: Hatakeyama, T]]
+
[[Category: Goda S]]
-
[[Category: Hozawa, T]]
+
[[Category: Hatakeyama T]]
-
[[Category: Ishii, K]]
+
[[Category: Hozawa T]]
-
[[Category: Kamiya, T]]
+
[[Category: Ishii K]]
-
[[Category: Kusunoki, M]]
+
[[Category: Kamiya T]]
-
[[Category: Unno, H]]
+
[[Category: Kusunoki M]]
-
[[Category: C-type lectin]]
+
[[Category: Unno H]]
-
[[Category: Cel-iv]]
+
-
[[Category: Melibiose]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Crystal structure of CEL-IV complexed with Melibiose

PDB ID 3alt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools