This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ns0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:49, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==The C2A domain of Rabphilin 3A in complex with PI(4,5)P2==
==The C2A domain of Rabphilin 3A in complex with PI(4,5)P2==
-
<StructureSection load='4ns0' size='340' side='right' caption='[[4ns0]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='4ns0' size='340' side='right'caption='[[4ns0]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ns0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NS0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NS0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ns0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NS0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NS0 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PIO:[(2R)-2-OCTANOYLOXY-3-[OXIDANYL-[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIS(OXIDANYL)-4,5-DIPHOSPHONOOXY-CYCLOHEXYL]OXY-PHOSPHORYL]OXY-PROPYL]+OCTANOATE'>PIO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4np9|4np9]], [[4lt7|4lt7]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PIO:[(2R)-2-OCTANOYLOXY-3-[OXIDANYL-[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIS(OXIDANYL)-4,5-DIPHOSPHONOOXY-CYCLOHEXYL]OXY-PHOSPHORYL]OXY-PROPYL]+OCTANOATE'>PIO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rph3a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ns0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ns0 OCA], [https://pdbe.org/4ns0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ns0 RCSB], [https://www.ebi.ac.uk/pdbsum/4ns0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ns0 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ns0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ns0 OCA], [http://pdbe.org/4ns0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ns0 RCSB], [http://www.ebi.ac.uk/pdbsum/4ns0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ns0 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RP3A_RAT RP3A_RAT]] Protein transport. Probably involved with Ras-related protein Rab-3A in synaptic vesicle traffic and/or synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal.
+
[https://www.uniprot.org/uniprot/RP3A_RAT RP3A_RAT] Protein transport. Probably involved with Ras-related protein Rab-3A in synaptic vesicle traffic and/or synaptic vesicle fusion. Could play a role in neurotransmitter release by regulating membrane flow in the nerve terminal.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 4ns0" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4ns0" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Exophilin 3D structures|Exophilin 3D structures]]
 +
*[[Rabphilin|Rabphilin]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
+
[[Category: Large Structures]]
-
[[Category: Buxaderas, M]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Corbalan-Garcia, S]]
+
[[Category: Buxaderas M]]
-
[[Category: Ferrer-Orta, C]]
+
[[Category: Corbalan-Garcia S]]
-
[[Category: Gomez-Fernandez, J C]]
+
[[Category: Ferrer-Orta C]]
-
[[Category: Guerra, P]]
+
[[Category: Gomez-Fernandez JC]]
-
[[Category: Guerrero-Valero, M]]
+
[[Category: Guerra P]]
-
[[Category: Guillen, J]]
+
[[Category: Guerrero-Valero M]]
-
[[Category: Luengo-Gil, G]]
+
[[Category: Guillen J]]
-
[[Category: Perez-sanchez, D]]
+
[[Category: Luengo-Gil G]]
-
[[Category: Pous, J]]
+
[[Category: Perez-sanchez D]]
-
[[Category: Verdaguer, N]]
+
[[Category: Pous J]]
-
[[Category: C-2 domain fold]]
+
[[Category: Verdaguer N]]
-
[[Category: C2 domain]]
+
-
[[Category: C2a]]
+
-
[[Category: Calcium binding]]
+
-
[[Category: Exophilin-1]]
+
-
[[Category: Phospholipid binding]]
+
-
[[Category: Protein transport]]
+
-
[[Category: Rabphilin-3a]]
+
-
[[Category: Synaptic exocytosis metal-binding]]
+

Current revision

The C2A domain of Rabphilin 3A in complex with PI(4,5)P2

PDB ID 4ns0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4ns0"
Personal tools