4jvf
From Proteopedia
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==The Crystal structure of PDE6D in complex with the inhibitor (s)-5== | ==The Crystal structure of PDE6D in complex with the inhibitor (s)-5== | ||
- | <StructureSection load='4jvf' size='340' side='right' caption='[[4jvf]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='4jvf' size='340' side='right'caption='[[4jvf]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4jvf]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4jvf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JVF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JVF FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=17X:(2S)-2-(2-PHENYL-1H-BENZIMIDAZOL-1-YL)-2-(PIPERIDIN-4-YL)ETHYL+1-(1-BENZYL-1H-BENZIMIDAZOL-2-YL)PIPERIDINE-4-CARBOXYLATE'>17X</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=17X:(2S)-2-(2-PHENYL-1H-BENZIMIDAZOL-1-YL)-2-(PIPERIDIN-4-YL)ETHYL+1-(1-BENZYL-1H-BENZIMIDAZOL-2-YL)PIPERIDINE-4-CARBOXYLATE'>17X</scene></td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jvf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jvf OCA], [https://pdbe.org/4jvf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jvf RCSB], [https://www.ebi.ac.uk/pdbsum/4jvf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jvf ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/PDE6D_HUMAN PDE6D_HUMAN] Acts as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude and does so by decreasing the nucleotide dissociation rate. Stabilizes Arl3-GTP by decreasing the nucleotide dissociation (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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==See Also== | ==See Also== | ||
- | *[[Phosphodiesterase|Phosphodiesterase]] | + | *[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: Bastiaens | + | [[Category: Large Structures]] |
- | [[Category: Chandra | + | [[Category: Bastiaens P]] |
- | [[Category: Gunther | + | [[Category: Chandra A]] |
- | [[Category: Hahn | + | [[Category: Gunther Z]] |
- | [[Category: Hoffmann | + | [[Category: Hahn S]] |
- | [[Category: Ismail | + | [[Category: Hoffmann M]] |
- | [[Category: Papke | + | [[Category: Ismail S]] |
- | [[Category: Triola | + | [[Category: Papke B]] |
- | [[Category: Vartak | + | [[Category: Triola G]] |
- | [[Category: Waldmann | + | [[Category: Vartak N]] |
- | [[Category: Wittinghofer | + | [[Category: Waldmann H]] |
- | + | [[Category: Wittinghofer A]] | |
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Current revision
The Crystal structure of PDE6D in complex with the inhibitor (s)-5
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Categories: Homo sapiens | Large Structures | Bastiaens P | Chandra A | Gunther Z | Hahn S | Hoffmann M | Ismail S | Papke B | Triola G | Vartak N | Waldmann H | Wittinghofer A