2x5v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:35, 6 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
==80 microsecond laue diffraction snapshot from crystals of a photosynthetic reaction centre 3 millisecond following photoactivation.==
==80 microsecond laue diffraction snapshot from crystals of a photosynthetic reaction centre 3 millisecond following photoactivation.==
-
<StructureSection load='2x5v' size='340' side='right' caption='[[2x5v]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='2x5v' size='340' side='right'caption='[[2x5v]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2x5v]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Blastochloris_viridis Blastochloris viridis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X5V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2X5V FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2x5v]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Blastochloris_viridis Blastochloris viridis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X5V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X5V FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BCB:BACTERIOCHLOROPHYLL+B'>BCB</scene>, <scene name='pdbligand=BPB:BACTERIOPHEOPHYTIN+B'>BPB</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MQ7:MENAQUINONE-7'>MQ7</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BPB:BACTERIOPHEOPHYTIN+B'>BPB</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MQ7:MENAQUINONE-7'>MQ7</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1dxr|1dxr]], [[7prc|7prc]], [[1prc|1prc]], [[2wjm|2wjm]], [[1vrn|1vrn]], [[3prc|3prc]], [[2x5u|2x5u]], [[1r2c|1r2c]], [[6prc|6prc]], [[2wjn|2wjn]], [[5prc|5prc]], [[2prc|2prc]], [[2jbl|2jbl]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x5v OCA], [https://pdbe.org/2x5v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x5v RCSB], [https://www.ebi.ac.uk/pdbsum/2x5v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x5v ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2x5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x5v OCA], [http://pdbe.org/2x5v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2x5v RCSB], [http://www.ebi.ac.uk/pdbsum/2x5v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2x5v ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RCEM_RHOVI RCEM_RHOVI]] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. [[http://www.uniprot.org/uniprot/CYCR_RHOVI CYCR_RHOVI]] The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. [[http://www.uniprot.org/uniprot/RCEL_RHOVI RCEL_RHOVI]] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. [[http://www.uniprot.org/uniprot/RCEH_RHOVI RCEH_RHOVI]] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
+
[https://www.uniprot.org/uniprot/RCEL_BLAVI RCEL_BLAVI] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x5/2x5v_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x5/2x5v_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 32: Line 31:
==See Also==
==See Also==
-
*[[Cytochrome c|Cytochrome c]]
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 38: Line 37:
</StructureSection>
</StructureSection>
[[Category: Blastochloris viridis]]
[[Category: Blastochloris viridis]]
-
[[Category: Andersson, M]]
+
[[Category: Large Structures]]
-
[[Category: Cammarata, M]]
+
[[Category: Andersson M]]
-
[[Category: Davidsson, J]]
+
[[Category: Cammarata M]]
-
[[Category: Eklund, M]]
+
[[Category: Davidsson J]]
-
[[Category: Fritz, E]]
+
[[Category: Eklund M]]
-
[[Category: Groenhof, G]]
+
[[Category: Fritz E]]
-
[[Category: Johansson, L C]]
+
[[Category: Groenhof G]]
-
[[Category: Katona, G]]
+
[[Category: Johansson LC]]
-
[[Category: Malmerberg, E]]
+
[[Category: Katona G]]
-
[[Category: Neutze, R]]
+
[[Category: Malmerberg E]]
-
[[Category: Vincent, J]]
+
[[Category: Neutze R]]
-
[[Category: Wohri, A B]]
+
[[Category: Vincent J]]
-
[[Category: Wulff, M]]
+
[[Category: Wohri AB]]
-
[[Category: Cell membrane]]
+
[[Category: Wulff M]]
-
[[Category: Electron transport]]
+
-
[[Category: Formylation]]
+
-
[[Category: Lipidic-sponge phase]]
+
-
[[Category: Lipid]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+

Current revision

80 microsecond laue diffraction snapshot from crystals of a photosynthetic reaction centre 3 millisecond following photoactivation.

PDB ID 2x5v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2x5v"
Personal tools