This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fe5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:29, 1 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from bovine kidney==
==Crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from bovine kidney==
-
<StructureSection load='3fe5' size='340' side='right' caption='[[3fe5]], [[Resolution|resolution]] 2.51&Aring;' scene=''>
+
<StructureSection load='3fe5' size='340' side='right'caption='[[3fe5]], [[Resolution|resolution]] 2.51&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3fe5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FE5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FE5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3fe5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FE5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FE5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.51&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2qnk|2qnk]], [[1zvf|1zvf]], [[1yfy|1yfy]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fe5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fe5 OCA], [https://pdbe.org/3fe5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fe5 RCSB], [https://www.ebi.ac.uk/pdbsum/3fe5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fe5 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-hydroxyanthranilate_3,4-dioxygenase 3-hydroxyanthranilate 3,4-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.6 1.13.11.6] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fe5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fe5 OCA], [http://pdbe.org/3fe5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fe5 RCSB], [http://www.ebi.ac.uk/pdbsum/3fe5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3fe5 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/3HAO_BOVIN 3HAO_BOVIN]] Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate (By similarity).[HAMAP-Rule:MF_03019]
+
[https://www.uniprot.org/uniprot/3HAO_BOVIN 3HAO_BOVIN] Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate (By similarity).[HAMAP-Rule:MF_03019]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/3fe5_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/3fe5_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 33: Line 31:
==See Also==
==See Also==
-
*[[Dioxygenase|Dioxygenase]]
+
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 3-hydroxyanthranilate 3,4-dioxygenase]]
 
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Dilovic, I]]
+
[[Category: Large Structures]]
-
[[Category: Gliubich, F]]
+
[[Category: Dilovic I]]
-
[[Category: Malpeli, G]]
+
[[Category: Gliubich F]]
-
[[Category: Matkovic-Calogovic, D]]
+
[[Category: Malpeli G]]
-
[[Category: Zanotti, G]]
+
[[Category: Matkovic-Calogovic D]]
-
[[Category: Cupin]]
+
[[Category: Zanotti G]]
-
[[Category: Dioxygenase]]
+
-
[[Category: Iron]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Quinolinic acid]]
+

Current revision

Crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from bovine kidney

PDB ID 3fe5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3fe5"
Personal tools