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4j5s

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Current revision (21:34, 16 November 2022) (edit) (undo)
 
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==TARG1 (C6orf130), Terminal ADP-ribose Glycohydrolase 1 ADP-ribose complex==
==TARG1 (C6orf130), Terminal ADP-ribose Glycohydrolase 1 ADP-ribose complex==
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<StructureSection load='4j5s' size='340' side='right' caption='[[4j5s]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
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<StructureSection load='4j5s' size='340' side='right'caption='[[4j5s]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4j5s]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J5S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J5S FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4j5s]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J5S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J5S FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BO4:BORATE+ION'>BO4</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SBE:1,3,2-DIOXABOROLAN-2-OL'>SBE</scene>, <scene name='pdbligand=ZZC:[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL+[[(2R,3R)-2,3-DIHYDROXY-4-OXO-PENTOXY]-OXIDO-PHOSPHORYL]+PHOSPHATE'>ZZC</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BO4:BORATE+ION'>BO4</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SBE:1,3,2-DIOXABOROLAN-2-OL'>SBE</scene>, <scene name='pdbligand=ZZC:[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL+[[(2R,3R)-2,3-DIHYDROXY-4-OXO-PENTOXY]-OXIDO-PHOSPHORYL]+PHOSPHATE'>ZZC</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4j5q|4j5q]], [[4j5r|4j5r]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j5s OCA], [https://pdbe.org/4j5s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j5s RCSB], [https://www.ebi.ac.uk/pdbsum/4j5s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j5s ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">OARD1, C6orf130 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j5s OCA], [http://pdbe.org/4j5s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4j5s RCSB], [http://www.ebi.ac.uk/pdbsum/4j5s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4j5s ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/OARD1_HUMAN OARD1_HUMAN]] Deacetylates O-acetyl-ADP ribose, a signaling molecule generated by the deacetylation of acetylated lysine residues in histones and other proteins. Catalyzes the deacylation of O-acetyl-ADP-ribose, O-propionyl-ADP-ribose and O-butyryl-ADP-ribose, yielding ADP-ribose plus acetate, propionate and butyrate, respectively.
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[https://www.uniprot.org/uniprot/OARD1_HUMAN OARD1_HUMAN] Deacetylates O-acetyl-ADP ribose, a signaling molecule generated by the deacetylation of acetylated lysine residues in histones and other proteins. Catalyzes the deacylation of O-acetyl-ADP-ribose, O-propionyl-ADP-ribose and O-butyryl-ADP-ribose, yielding ADP-ribose plus acetate, propionate and butyrate, respectively.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Appel, C D]]
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[[Category: Large Structures]]
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[[Category: Krahn, J]]
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[[Category: Appel CD]]
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[[Category: Schellenberg, M J]]
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[[Category: Krahn J]]
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[[Category: Williams, R S]]
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[[Category: Schellenberg MJ]]
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[[Category: Adp-ribose]]
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[[Category: Williams RS]]
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[[Category: Cellular signaling]]
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[[Category: Dna repair]]
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[[Category: Glycohydrolase]]
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[[Category: Hydrolase]]
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[[Category: Macro domain]]
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[[Category: Parp]]
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[[Category: Poly-adp ribose]]
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Current revision

TARG1 (C6orf130), Terminal ADP-ribose Glycohydrolase 1 ADP-ribose complex

PDB ID 4j5s

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