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| ==Contact pathway inhibitor from a sand fly== | | ==Contact pathway inhibitor from a sand fly== |
- | <StructureSection load='4jd9' size='340' side='right' caption='[[4jd9]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='4jd9' size='340' side='right'caption='[[4jd9]], [[Resolution|resolution]] 2.60Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4jd9]] is a 7 chain structure with sequence from [http://en.wikipedia.org/wiki/Phldu Phldu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JD9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JD9 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4jd9]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Phlebotomus_duboscqi Phlebotomus duboscqi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JD9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JD9 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.601Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">K03, M03 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=37738 PHLDU])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jd9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jd9 OCA], [http://pdbe.org/4jd9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jd9 RCSB], [http://www.ebi.ac.uk/pdbsum/4jd9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jd9 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jd9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jd9 OCA], [https://pdbe.org/4jd9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jd9 RCSB], [https://www.ebi.ac.uk/pdbsum/4jd9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jd9 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q06K46_PHLDU Q06K46_PHLDU] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Phldu]] | + | [[Category: Large Structures]] |
- | [[Category: Alvarenga, P]] | + | [[Category: Phlebotomus duboscqi]] |
- | [[Category: Andersen, J F]] | + | [[Category: Alvarenga P]] |
- | [[Category: Xu, X]] | + | [[Category: Andersen JF]] |
- | [[Category: Binding protein]] | + | [[Category: Xu X]] |
- | [[Category: Glycosaminoglycan]]
| + | |
- | [[Category: Odorant-binding protein]]
| + | |
- | [[Category: Polyphosphate]]
| + | |
- | [[Category: Protein binding]]
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| Structural highlights
Function
Q06K46_PHLDU
Publication Abstract from PubMed
OBJECTIVE: Polyphosphate and heparin are anionic polymers released by activated mast cells and platelets that are known to stimulate the contact pathway of coagulation. These polymers promote both the autoactivation of factor XII and the assembly of complexes containing factor XI, prekallikrein, and high-molecular-weight kininogen. We are searching for salivary proteins from blood-feeding insects that counteract the effect of procoagulant and proinflammatory factors in the host, including elements of the contact pathway. APPROACH AND RESULTS: Here, we evaluate the ability of the sand fly salivary proteins, PdSP15a and PdSP15b, to inhibit the contact pathway by disrupting binding of its components to anionic polymers. We attempt to demonstrate binding of the proteins to polyphosphate, heparin, and dextran sulfate. We also evaluate the effect of this binding on contact pathway reactions. We also set out to determine the x-ray crystal structure of PdSP15b and examine the determinants of relevant molecular interactions. Both proteins bind polyphosphate, heparin, and dextran sulfate with high affinity. Through this mechanism they inhibit the autoactivation of factor XII and factor XI, the reciprocal activation of factor XII and prekallikrein, the activation of factor XI by thrombin and factor XIIa, the cleavage of high-molecular-weight kininogen in plasma, and plasma extravasation induced by polyphosphate. The crystal structure of PdSP15b contains an amphipathic helix studded with basic side chains that forms the likely interaction surface. CONCLUSIONS: The results of these studies indicate that the binding of anionic polymers by salivary proteins is used by blood feeders as an antihemostatic/anti-inflammatory mechanism.
Novel Family of Insect Salivary Inhibitors Blocks Contact Pathway Activation by Binding to Polyphosphate, Heparin, and Dextran Sulfate.,Alvarenga PH, Xu X, Oliveira F, Chagas AC, Nascimento CR, Francischetti IM, Juliano MA, Juliano L, Scharfstein J, Valenzuela JG, Ribeiro JM, Andersen JF Arterioscler Thromb Vasc Biol. 2013 Oct 3. PMID:24092749[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Alvarenga PH, Xu X, Oliveira F, Chagas AC, Nascimento CR, Francischetti IM, Juliano MA, Juliano L, Scharfstein J, Valenzuela JG, Ribeiro JM, Andersen JF. Novel Family of Insect Salivary Inhibitors Blocks Contact Pathway Activation by Binding to Polyphosphate, Heparin, and Dextran Sulfate. Arterioscler Thromb Vasc Biol. 2013 Oct 3. PMID:24092749 doi:http://dx.doi.org/10.1161/ATVBAHA.113.302482
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