3ufe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:56, 14 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Structure of transcriptional antiterminator (BGLG-family) at 1.5 A resolution==
==Structure of transcriptional antiterminator (BGLG-family) at 1.5 A resolution==
-
<StructureSection load='3ufe' size='340' side='right' caption='[[3ufe]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='3ufe' size='340' side='right'caption='[[3ufe]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ufe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UFE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3UFE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ufe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UFE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gwh|3gwh]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BSU13880, glcT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ufe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ufe OCA], [https://pdbe.org/3ufe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ufe RCSB], [https://www.ebi.ac.uk/pdbsum/3ufe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ufe ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ufe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ufe OCA], [http://pdbe.org/3ufe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ufe RCSB], [http://www.ebi.ac.uk/pdbsum/3ufe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ufe ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/GLCT_BACSU GLCT_BACSU]] Mediates the positive regulation of the glucose PTS operon (ptsGHI) by functioning as an antiterminator factor of transcription via its interaction with the RNA-antiterminator (RAT) sequence located upstream of the ptsG gene. The RNA-binding domain of GlcT directly binds to the RNA antiterminator (RAT) sequence and prevents transcriptional termination. GlcT binding requires two identical and nearly symmetrical triple base pairings in the RAT sequence.<ref>PMID:11902727</ref> <ref>PMID:9765562</ref>
+
[https://www.uniprot.org/uniprot/GLCT_BACSU GLCT_BACSU] Mediates the positive regulation of the glucose PTS operon (ptsGHI) by functioning as an antiterminator factor of transcription via its interaction with the RNA-antiterminator (RAT) sequence located upstream of the ptsG gene. The RNA-binding domain of GlcT directly binds to the RNA antiterminator (RAT) sequence and prevents transcriptional termination. GlcT binding requires two identical and nearly symmetrical triple base pairings in the RAT sequence.<ref>PMID:11902727</ref> <ref>PMID:9765562</ref>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus globigii migula 1900]]
+
[[Category: Bacillus subtilis]]
-
[[Category: Becker, S]]
+
[[Category: Large Structures]]
-
[[Category: Grosse, C]]
+
[[Category: Becker S]]
-
[[Category: Himmel, S]]
+
[[Category: Grosse C]]
-
[[Category: Sheldrick, G M]]
+
[[Category: Himmel S]]
-
[[Category: Uson, I]]
+
[[Category: Sheldrick GM]]
-
[[Category: Arcimboldo]]
+
[[Category: Uson I]]
-
[[Category: Extended helix bundle]]
+
-
[[Category: Transcription]]
+

Current revision

Structure of transcriptional antiterminator (BGLG-family) at 1.5 A resolution

PDB ID 3ufe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools