4hiz
From Proteopedia
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==Phage phi92 endosialidase== | ==Phage phi92 endosialidase== | ||
- | <StructureSection load='4hiz' size='340' side='right' caption='[[4hiz]], [[Resolution|resolution]] 1.60Å' scene=''> | + | <StructureSection load='4hiz' size='340' side='right'caption='[[4hiz]], [[Resolution|resolution]] 1.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4hiz]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4hiz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacteria_phage_phi92 Enterobacteria phage phi92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HIZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HIZ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand= | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.601Å</td></tr> |
- | < | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>, <scene name='pdbligand=SLB:5-N-ACETYL-BETA-D-NEURAMINIC+ACID'>SLB</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hiz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hiz OCA], [https://pdbe.org/4hiz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hiz RCSB], [https://www.ebi.ac.uk/pdbsum/4hiz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hiz ProSAT]</span></td></tr> | |
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- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/I7HXG2_9CAUD I7HXG2_9CAUD] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Surface-associated capsular polysaccharides (CPSs) protect bacteria against phage infection and enhance pathogenicity by interfering with the function of the host innate immune system. The CPS of enteropathogenic Escherichia coli K92 is a unique sialic acid polymer (polySia) with alternating alpha2,8- and alpha2,9-linkages. This CPS can be digested by the gene 143 encoded endosialidase of bacteriophage phi92. Here we report the crystal structure of the phi92 endosialidase in complex with a dimer of alpha2,9-linked sialic acid and analyze its catalytic functions. Unlike the well characterized and homologous endosialidase of phage K1F, the phi92 endosialidase is a bifunctional enzyme with high activity against alpha2,8- and low activity against alpha2,9-linkages in a polySia chain. Moreover, in contrast to the processive K1F endosialidase, the phi92 endosialidase degrades the polymer in a non-processive mode. Beyond describing the first endosialidase with alpha2,9-specificity, our data introduce a novel platform for studies of endosialidase regioselectivity and for engineering highly active alpha2,9-specific enzymes. | ||
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+ | Structure and biochemical characterization of bacteriophage phi92 endosialidase.,Schwarzer D, Browning C, Stummeyer K, Oberbeck A, Muhlenhoff M, Gerardy-Schahn R, Leiman PG Virology. 2015 Mar;477:133-143. doi: 10.1016/j.virol.2014.11.002. Epub 2014 Dec , 1. PMID:25475852<ref>PMID:25475852</ref> | ||
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+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 4hiz" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Endo-alpha-sialidase]] | ||
[[Category: Enterobacteria phage phi92]] | [[Category: Enterobacteria phage phi92]] | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Browning C]] |
- | [[Category: | + | [[Category: Leiman PG]] |
- | [[Category: | + | [[Category: Schwarzer D]] |
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Current revision
Phage phi92 endosialidase
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