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3md9

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==Structure of apo form of a periplasmic heme binding protein==
==Structure of apo form of a periplasmic heme binding protein==
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<StructureSection load='3md9' size='340' side='right' caption='[[3md9]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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<StructureSection load='3md9' size='340' side='right'caption='[[3md9]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3md9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pestis"_(lehmann_and_neumann_1896)_migula_1900 "bacillus pestis" (lehmann and neumann 1896) migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MD9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MD9 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3md9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MD9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MD9 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3md8|3md8]], [[3nu1|3nu1]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hmuT, YPO0281, y0541, YP_0436 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 "Bacillus pestis" (Lehmann and Neumann 1896) Migula 1900])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3md9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3md9 OCA], [https://pdbe.org/3md9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3md9 RCSB], [https://www.ebi.ac.uk/pdbsum/3md9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3md9 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3md9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3md9 OCA], [http://pdbe.org/3md9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3md9 RCSB], [http://www.ebi.ac.uk/pdbsum/3md9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3md9 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/HMUT_YERPE HMUT_YERPE]] Part of the binding-protein-dependent transport system for hemin.
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[https://www.uniprot.org/uniprot/HMUT_YERPE HMUT_YERPE] Part of the binding-protein-dependent transport system for hemin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/md/3md9_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/md/3md9_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Goetz, B A]]
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[[Category: Large Structures]]
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[[Category: Locher, K P]]
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[[Category: Yersinia pestis]]
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[[Category: Mattle, D]]
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[[Category: Goetz BA]]
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[[Category: Alpha beta protein]]
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[[Category: Locher KP]]
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[[Category: Heme transport]]
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[[Category: Mattle D]]
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[[Category: Iron transport]]
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[[Category: Rigid helical backbone]]
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[[Category: Substrate-free]]
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[[Category: Transport protein]]
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Current revision

Structure of apo form of a periplasmic heme binding protein

PDB ID 3md9

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